RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 FGFBP1Q14512 234 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 SLC46A1Q96NT5 459 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 ARRDC1-AS1Q9H2J1 176 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 ATP13A2Q9NQ11 1180 aa20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.68■□□□□ 0.9
PDLIM2-203ENST00000339162 TTC28Q96AY4 2481 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 ADRA2AP08913 450 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 PSMB9P28065 219 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 MLLT10P55197 1068 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 CDK5Q00535 292 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 NKAIN1Q4KMZ8 207 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 RABEPKQ7Z6M1 372 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 ZBTB44Q8NCP5 570 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 TEX47Q8TBZ9 253 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 TMEM239Q8WW34 195 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 FUNDC2Q9BWH2 189 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 TMEM27Q9HBJ8 222 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 FKBP14Q9NWM8 211 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 TAS2R16Q9NYV7 291 aa20.67■□□□□ 0.9
PDLIM2-203ENST00000339162 CDK1P06493 297 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 SYPP08247 313 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 PPICP45877 212 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 TUBA3CQ13748 450 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 C9orf40Q8IXQ3 194 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 CADM2Q8N3J6 435 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 STX19Q8N4C7 294 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 POGLUT1Q8NBL1 392 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 MYDGFQ969H8 173 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 ZNF559Q9BR84 538 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 DPH1Q9BZG8 443 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 A0A1B0GWA3 101 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 POLR1CO15160 346 aaPredicted RBP20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 CH25HO95992 272 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 ZGLP1P0C6A0 271 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 FPR3P25089 353 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 SNRPGP62308 76 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 TEKQ02763 1124 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 LSAMPQ13449 338 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 SLC30A6Q6NXT4 461 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 RASSF6Q6ZTQ3 369 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 SVOPQ8N4V2 548 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 OR8J1Q8NGP2 316 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 ZNF420Q8TAQ5 688 aaPredicted RBP20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 SIDT1Q9NXL6 827 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 GPR52Q9Y2T5 361 aa20.66■□□□□ 0.9
PDLIM2-203ENST00000339162 C2orf92A0A1B0GVN3 265 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 SERINC4A6NH21 518 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 KLF4O43474 513 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 FMO6PO60774 539 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 CSTAP01040 98 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 GUSBP08236 651 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 MAKP20794 623 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 PCYT1AP49585 367 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 ANGPT1Q15389 498 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 SNAPC1Q16533 368 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 GRAMD2AQ8IUY3 354 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 DAZLQ92904 295 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 ADIPOR1Q96A54 375 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 LCORQ96JN0 433 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 NUP210LQ5VU65 1888 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 GNB5O14775 395 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 IFI30P13284 250 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 MPLP40238 635 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 SMSP52788 366 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 SLC27A4Q6P1M0 643 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 PPP1R3BQ86XI6 285 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 SLITRK4Q8IW52 837 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 TOR1AIP2Q8NFQ8 470 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 ADOQ96SZ5 270 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 DOK1Q99704 481 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 TSSK6Q9BXA6 273 aa20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 AKIRIN1Q9H9L7 192 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 ZNF223Q9UK11 482 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-203ENST00000339162 A0A0B4J2E0 115 aa20.64■□□□□ 0.89
PDLIM2-203ENST00000339162 A0A1B0GX12 115 aa20.64■□□□□ 0.89
PDLIM2-203ENST00000339162 A0A1W2PPW3 197 aa20.64■□□□□ 0.89
PDLIM2-203ENST00000339162 SH3D21A4FU49 640 aa20.64■□□□□ 0.89
PDLIM2-203ENST00000339162 ZNF701M0R085 212 aaPredicted RBP20.64■□□□□ 0.89
PDLIM2-203ENST00000339162 RFPL3O75679 317 aa20.64■□□□□ 0.89
PDLIM2-203ENST00000339162 EBPQ15125 230 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-203ENST00000339162 LCN10Q6JVE6 187 aa20.64■□□□□ 0.89
PDLIM2-203ENST00000339162 OR14A16Q8NHC5 309 aa20.64■□□□□ 0.89
PDLIM2-203ENST00000339162 TBC1D23Q9NUY8 699 aa20.64■□□□□ 0.89
PDLIM2-203ENST00000339162 D6RAR5 112 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 NR0B1P51843 470 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 CD226Q15762 336 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 ZNF613Q6PF04 617 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 APOOLQ6UXV4 268 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 ERI1Q8IV48 349 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 TRUB1Q8WWH5 349 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 LRR1Q96L50 414 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 POLR2J2Q9GZM3 115 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 SLC25A19Q9HC21 320 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 MEPEQ9NQ76 525 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 TTC36A6NLP5 189 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 EFCAB7A8K855 629 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 IDSB3KWA1 339 aa20.63■□□□□ 0.89
PDLIM2-203ENST00000339162 STAT5AP42229 794 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms