RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 CLOCKO15516 846 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 SOX30O94993 753 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 CPA3P15088 417 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 KRT4P19013 534 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 CCT5P48643 541 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 CARD18P57730 90 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 NAA20P61599 178 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 PCLAFQ15004 111 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 OXLD1Q5BKU9 147 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 CFAP157Q5JU67 520 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 MFSD12Q6NUT3 480 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 ADAM5Q6NVV9 412 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 FIGNL1Q6PIW4 674 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 MISPQ8IVT2 679 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 LILRA2Q8N149 483 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 CCDC63Q8NA47 563 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 MAPK1IP1LQ8NDC0 245 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 ZFP28Q8NHY6 868 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 RNF128Q8TEB7 428 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 ABHD3Q8WU67 409 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 OSTF1Q92882 214 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 FBXW5Q969U6 566 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 GTPBP3Q969Y2 492 aaKnown RBP13.93□□□□□ -0.18
LINC01116-202ENST00000339037 CIDECQ96AQ7 238 aaPredicted RBP13.93□□□□□ -0.18
LINC01116-202ENST00000339037 ZBED6CLQ96FA7 236 aaPredicted RBP13.93□□□□□ -0.18
LINC01116-202ENST00000339037 TRMT61AQ96FX7 289 aaKnown RBP13.93□□□□□ -0.18
LINC01116-202ENST00000339037 ZNF764Q96H86 408 aaPredicted RBP13.93□□□□□ -0.18
LINC01116-202ENST00000339037 METTL2AQ96IZ6 378 aaKnown RBP13.93□□□□□ -0.18
LINC01116-202ENST00000339037 KLHL15Q96M94 604 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 MS4A4EQ96PG1 132 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 HDHD5Q9BXW7 423 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 L2HGDHQ9H9P8 463 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 UBQLN4Q9NRR5 601 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 CCL27Q9Y4X3 112 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 SNX8Q9Y5X2 465 aa13.93□□□□□ -0.18
LINC01116-202ENST00000339037 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 SCDO00767 359 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 SEC22BO75396 215 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 KCNK2O95069 426 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 UROSP10746 265 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 IL32P24001 234 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 SFTPDP35247 375 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 EIF1P41567 113 aaKnown RBP13.92□□□□□ -0.18
LINC01116-202ENST00000339037 RNPS1Q15287 305 aaKnown RBP13.92□□□□□ -0.18
LINC01116-202ENST00000339037 ZNF239Q16600 458 aaKnown RBP13.92□□□□□ -0.18
LINC01116-202ENST00000339037 TMEM201Q5SNT2 666 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 LIPMQ5VYY2 423 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 HEPHL1Q6MZM0 1159 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 VASH1Q7L8A9 365 aaPredicted RBP13.92□□□□□ -0.18
LINC01116-202ENST00000339037 ZAR1Q86SH2 424 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 TRABD2AQ86V40 505 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 GABRG1Q8N1C3 465 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 SLC16A11Q8NCK7 471 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 NUP43Q8NFH3 380 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 OR6Y1Q8NGX8 325 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 OR2W6PQ8NHA6 318 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 ROBO4Q8WZ75 1007 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 PPCDCQ96CD2 204 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 GIMAP5Q96F15 307 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 ESRP2Q9H6T0 727 aaKnown RBP13.92□□□□□ -0.18
LINC01116-202ENST00000339037 PPCSQ9HAB8 311 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 NGBQ9NPG2 151 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 TIGARQ9NQ88 270 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 NTMQ9P121 344 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 KLHL13Q9P2N7 655 aa13.92□□□□□ -0.18
LINC01116-202ENST00000339037 CADP27708 2225 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 OVOL3O00110 214 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 GCM2O75603 506 aaPredicted RBP13.91□□□□□ -0.18
LINC01116-202ENST00000339037 TP53P04637 393 aaPredicted RBP13.91□□□□□ -0.18
LINC01116-202ENST00000339037 CD3EP07766 207 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 SOD3P08294 240 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 ACP2P11117 423 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 ELK4P28324 431 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 LCN1P31025 176 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 SERPINB4P48594 390 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 PRIM2P49643 509 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 MANFP55145 182 aaKnown RBP13.91□□□□□ -0.18
LINC01116-202ENST00000339037 KIAA0040Q15053 153 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 TAB1Q15750 504 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 CD226Q15762 336 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 DUSP5Q16690 384 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 TFAP2EQ6VUC0 442 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 C10orf107Q8IVU9 208 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 ZNF619Q8N2I2 560 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 COX18Q8N8Q8 333 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 OR2T11Q8NH01 316 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 LILRB1Q8NHL6 650 aaPredicted RBP13.91□□□□□ -0.18
LINC01116-202ENST00000339037 B4GALNT2Q8NHY0 566 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 POC1BQ8TC44 478 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 FAM110BQ8TC76 370 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 SMAP2Q8WU79 429 aaPredicted RBP13.91□□□□□ -0.18
LINC01116-202ENST00000339037 JADE3Q92613 823 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 CPNE4Q96A23 557 aaPredicted RBP13.91□□□□□ -0.18
LINC01116-202ENST00000339037 CCT7Q99832 543 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 KLHDC3Q9BQ90 382 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 REG4Q9BYZ8 158 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 ANKZF1Q9H8Y5 726 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 LRTM1Q9HBL6 345 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 FBXO34Q9NWN3 711 aa13.91□□□□□ -0.18
LINC01116-202ENST00000339037 C1orf109Q9NX04 203 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms