RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CRMP1Q14194 572 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 RANBP3LQ86VV4 465 aaPredicted RBP13.2□□□□□ -0.3
PCDH8-201ENST00000338862 PTCHD1Q96NR3 888 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 HCAR1Q9BXC0 346 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 ARL6Q9H0F7 186 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 LRRN3Q9H3W5 708 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 A4GALTQ9NPC4 353 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 MAB21L2Q9Y586 359 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 SIRT4Q9Y6E7 314 aaPredicted RBP13.2□□□□□ -0.3
PCDH8-201ENST00000338862 A0A1W2PR48 441 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 UNC119BA6NIH7 251 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 NPC1O15118 1278 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 OR10H2O60403 315 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 TBXA2RP21731 343 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 BMP8BP34820 402 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 MAPK9P45984 424 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 TPBGQ13641 420 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 EXOSC2Q13868 293 aaKnown RBP13.2□□□□□ -0.3
PCDH8-201ENST00000338862 CREB3L2Q70SY1 520 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 BMP8AQ7Z5Y6 402 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 NXPE3Q969Y0 559 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 ARRDC3Q96B67 414 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 OR14A2Q96R54 314 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 GTPBP2Q9BX10 602 aaKnown RBP13.2□□□□□ -0.3
PCDH8-201ENST00000338862 ZSCAN32Q9NX65 697 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 OR6C74A6NCV1 312 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 CDC42EP2O14613 210 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 SIGLEC5O15389 551 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 ADH5P11766 374 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 ADRB3P13945 408 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 SIGLEC14Q08ET2 396 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 EXOSC7Q15024 291 aaKnown RBP13.2□□□□□ -0.3
PCDH8-201ENST00000338862 DHCR24Q15392 516 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 FAM111BQ6SJ93 734 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 IKBIPQ70UQ0 350 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF547Q8IVP9 402 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 CNRIP1Q96F85 164 aaPredicted RBP13.2□□□□□ -0.3
PCDH8-201ENST00000338862 PPP1R16AQ96I34 528 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 MSLNLQ96KJ4 702 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 NIPAL2Q9H841 368 aa13.2□□□□□ -0.3
PCDH8-201ENST00000338862 LGI1O95970 557 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 RECKO95980 971 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 MAS1P04201 325 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 ACADLP28330 430 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 CTNNB1P35222 781 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 C2orf27AQ580R0 203 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 GDF7Q7Z4P5 450 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF761Q86XN6 746 aaPredicted RBP13.19□□□□□ -0.3
PCDH8-201ENST00000338862 SLC39A11Q8N1S5 342 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 C17orf47Q8NEP4 570 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 ABHD4Q8TB40 342 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 NXPE2Q96DL1 559 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 PIGUQ9H490 435 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 STARD5Q9NSY2 213 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 SIRT3Q9NTG7 399 aaPredicted RBP13.19□□□□□ -0.3
PCDH8-201ENST00000338862 CDHR4A6H8M9 788 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 CHP2O43745 196 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 DOK2O60496 412 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 SPDEFO95238 335 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 ITGB7P26010 798 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 RPS27P42677 84 aaKnown RBP13.19□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF155Q12901 538 aaPredicted RBP13.19□□□□□ -0.3
PCDH8-201ENST00000338862 CCSAPQ6IQ19 270 aaPredicted RBP13.19□□□□□ -0.3
PCDH8-201ENST00000338862 WDFY2Q96P53 400 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 WDR26Q9H7D7 661 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 TMEM27Q9HBJ8 222 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 TAS2R10Q9NYW0 307 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 BAIAP2Q9UQB8 552 aa13.19□□□□□ -0.3
PCDH8-201ENST00000338862 A0A1W2PP55 124 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 LEUTXA8MZ59 168 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 EPHA5P54756 1037 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 GALEQ14376 348 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 GRK1Q15835 563 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF793Q6ZN11 406 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 UBE2Q1Q7Z7E8 422 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 LRRC28Q86X40 367 aaPredicted RBP13.18□□□□□ -0.3
PCDH8-201ENST00000338862 GOT1L1Q8NHS2 421 aaPredicted RBP13.18□□□□□ -0.3
PCDH8-201ENST00000338862 ACOT11Q8WXI4 607 aaPredicted RBP13.18□□□□□ -0.3
PCDH8-201ENST00000338862 SMPDL3BQ92485 455 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 DERL3Q96Q80 235 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 ENKD1Q9H0I2 346 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 FBXL3Q9UKT7 428 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 TMEM129A0AVI4 362 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 EMC8O43402 210 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 NUDT14O95848 222 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 HPGDP15428 266 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 LAG3P18627 525 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 GABRA3P34903 492 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 PGDP52209 483 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 DUSP2Q05923 314 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF33BQ06732 778 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 C4orf46Q504U0 113 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 BEX5Q5H9J7 111 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 FCRLAQ7L513 359 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 OR11H7Q8NGC8 314 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 MOSPD2Q8NHP6 518 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 CCDC3Q9BQI4 270 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 SGPP1Q9BX95 441 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 CDH10Q9Y6N8 788 aa13.18□□□□□ -0.3
PCDH8-201ENST00000338862 WDR87Q6ZQQ6 2873 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms