RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 GFRALQ6UXV0 394 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 HMGN2P46Q86SG4 172 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 ATCAYQ86WG3 371 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 SIAH3Q8IW03 269 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 ZNF440Q8IYI8 595 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 MICU2Q8IYU8 434 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 TOR1AIP2Q8NFQ8 470 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 OR5W2Q8NH69 310 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 OR14L1PQ8NHC6 308 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 SLC26A7Q8TE54 656 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 CDRT15Q96T59 188 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 SLX1AQ9BQ83 275 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 QRSL1Q9H0R6 528 aaKnown RBP10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 TSPAN10Q9H1Z9 355 aaPredicted RBP10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 UBQLN3Q9H347 655 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 ZNF703Q9H7S9 590 aaPredicted RBP10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 TAS2R10Q9NYW0 307 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 TMEM181Q9P2C4 612 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 FBXL2Q9UKC9 423 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 SLC13A4Q9UKG4 626 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 GPC6Q9Y625 555 aaPredicted RBP10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 DSPPQ9NZW4 1301 aa10.84□□□□□ -0.67
SPTLC1-202ENST00000337841 NME4O00746 187 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ADAM10O14672 748 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 GMFGO60234 142 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ATP5HO75947 161 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 UBOX5O94941 541 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 IGHG3P01860 377 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 PABPC4LP0CB38 370 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 UBTFL6P0CB48 400 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 UQCRBP14927 111 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 HK1P19367 917 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 PGCP20142 388 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 RPS4Y1P22090 263 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 AQP1P29972 269 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 PRKAR1BP31321 381 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 PGM1P36871 562 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 SLC6A8P48029 635 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 GSK3BP49841 420 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 RNF144AP50876 292 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ZNF41P51814 821 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ZNF117Q03924 483 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 CBFBQ13951 182 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 SPATS1Q496A3 300 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 SAMD4BQ5PRF9 694 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ARHGAP11AQ6P4F7 1023 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 CCDC80Q76M96 950 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 TRILQ7L0X0 811 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 YRDCQ86U90 279 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 VRK2Q86Y07 508 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ARMC8Q8IUR7 673 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 DEFB107AQ8IZN7 70 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 TMCO5AQ8N6Q1 288 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 GALNT11Q8NCW6 608 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ST6GALNAC3Q8NDV1 305 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 FAM83FQ8NEG4 500 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 RASSF5Q8WWW0 418 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 C1GALT1C1Q96EU7 318 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 KCTD14Q9BQ13 255 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 OR2B2Q9GZK3 357 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 C1orf21Q9H246 121 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ALG2Q9H553 416 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 EXOSC3Q9NQT5 275 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 KLHL28Q9NXS3 571 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ABCD2Q9UBJ2 740 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ICAM5Q9UMF0 924 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ZNF443Q9Y2A4 671 aaPredicted RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 TLN1Q9Y490 2541 aaKnown RBP10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 SPTA1P02549 2419 aa10.83□□□□□ -0.68
SPTLC1-202ENST00000337841 ATRXP46100 2492 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 IGSF10Q6WRI0 2623 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 CENPVL1A0A0U1RR11 272 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 A0A1B0GVC2 190 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 ANKUB1A6NFN9 424 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 LINC01387J3KSC0 135 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 ZIC3O60481 467 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 MFN2O95140 757 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 CELA3AP09093 270 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 LINGO3P0C6S8 592 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 EIF1P41567 113 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 RASSF2P50749 326 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 CCR4P51679 360 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 TDGF1P3P51864 188 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 PCBP3P57721 371 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 EIPR1Q53HC9 387 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 WIPI1Q5MNZ9 446 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 MRPL2Q5T653 305 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 LCE2DQ5TA82 110 aaPredicted RBP10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 RNF220Q5VTB9 566 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 AAGABQ6PD74 315 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 DHRS4L2Q6PKH6 230 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 CBLN3Q6UW01 205 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 RINLQ6ZS11 566 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 ZNF550Q7Z398 422 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 GRAMD2AQ8IUY3 354 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 ARHGAP24Q8N264 748 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 RBM15BQ8NDT2 890 aaKnown RBP10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 FBXO27Q8NI29 283 aa10.82□□□□□ -0.68
SPTLC1-202ENST00000337841 NEIL3Q8TAT5 605 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms