RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 GPR37O15354 613 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 HLA-DQB1P01920 261 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 DBTP11182 482 aaKnown RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 IFNGR2P38484 337 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 CSNK1EP49674 416 aaKnown RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 P2RY4P51582 365 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 PLA2G16P53816 162 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 GFERP55789 205 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 BPIFB3P59826 476 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 TUBA1BP68363 451 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 ZNF155Q12901 538 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 HYAL4Q2M3T9 481 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 ZNF791Q3KP31 576 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 SYT14P1Q58G82 188 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 TUBA1AQ71U36 451 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 ADCK1Q86TW2 530 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 CLIP4Q8N3C7 705 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 OR5D16Q8NGK9 328 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 LMX1AQ8TE12 382 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 ADAMTS17Q8TE56 1095 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 ATOH1Q92858 354 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 OSTF1Q92882 214 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 CCDC74AQ96AQ1 378 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 BBS4Q96RK4 519 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 PTDSS2Q9BVG9 487 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 LHPPQ9H008 270 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 OR10A5Q9H207 317 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 MCCC2Q9HCC0 563 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 NRIP3Q9NQ35 241 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 MEPEQ9NQ76 525 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 SEC14L4Q9UDX3 406 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 FBXW2Q9UKT8 454 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 ZNF99A8MXY4 864 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 TRMUO75648 421 aaKnown RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 BGLAPP02818 100 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 FOLR1P15328 257 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 ELK4P28324 431 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 CENPAP49450 140 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 CLK1P49759 484 aaKnown RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 CYP4F2P78329 520 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 HSPB3Q12988 150 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 DDX39BQ13838 428 aaKnown RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 NTRK2Q16620 822 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 HIST3H3Q16695 136 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 TEX30Q5JUR7 227 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 GPR107Q5VW38 600 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 PXKQ7Z7A4 578 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 STK32CQ86UX6 486 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 ZBTB46Q86UZ6 589 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 PLD3Q8IV08 490 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 SLC44A2Q8IWA5 706 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 CCDC116Q8IYX3 515 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 OR52R1Q8NGF1 315 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 OR5AK3PQ8NH89 298 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 C16orf52Q8NHV5 167 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 DNAJA4Q8WW22 397 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 PROX1Q92786 737 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 SDCCAG3Q96C92 435 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 Q96MT0 163 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 CMTM3Q96MX0 182 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 ZNF582Q96NG8 517 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 WWTR1Q9GZV5 400 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 SPRTNQ9H040 489 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 VSX1Q9NZR4 365 aaPredicted RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 WARS2Q9UGM6 360 aaKnown RBP4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 CBLCQ9ULV8 474 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 DTX4Q9Y2E6 619 aa4.93□□□□□ -1.62
PRPF4B-201ENST00000337659 SERINC4A6NH21 518 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 TMX2-CTNND1H3BSU7 103 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 PRODHO43272 600 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 SRSF10O75494 262 aaKnown RBP4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 SNX4O95219 450 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 ALPPL2P10696 532 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 PNMTP11086 282 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 CTSEP14091 401 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 GNSP15586 552 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 CSRP1P21291 193 aaKnown RBP4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 ADH6P28332 368 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 DUSP3P51452 185 aaPredicted RBP4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 PCOLCEQ15113 449 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 CSRP2Q16527 193 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 DCST1Q5T197 706 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 UNQ9370/PRO34162Q6UXP9 181 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 KCTD8Q6ZWB6 473 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 OR9A4Q8NGU2 314 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 OR4Q3Q8NH05 313 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 ZNF519Q8TB69 540 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 MYCBPQ99417 103 aaPredicted RBP4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 SPOCK3Q9BQ16 436 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 SLIRPQ9GZT3 109 aaKnown RBP4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 PRTFDC1Q9NRG1 225 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 CIDEBQ9UHD4 219 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 KLHL21Q9UJP4 597 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 ZNF229Q9UJW7 825 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 FLVCR1Q9Y5Y0 555 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 PMF1-BGLAPU3KQ54 211 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 hCG_2039718K7EN88 272 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 M0R3G1 203 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 SOCS6O14544 535 aa4.92□□□□□ -1.62
PRPF4B-201ENST00000337659 FCMRO60667 390 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms