RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CFLARO15519 480 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 CXCL13O43927 109 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 SS18L1O75177 396 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-202ENST00000337571 HMGN2P05204 90 aaKnown RBP9.55□□□□□ -0.88
CAPN3-202ENST00000337571 IL11P20809 199 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 EFNA1P20827 205 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-202ENST00000337571 ALDH3A1P30838 453 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 SLC6A8P48029 635 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 CCT3P49368 545 aaKnown RBP9.55□□□□□ -0.88
CAPN3-202ENST00000337571 LTBQ06643 244 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 PDE7AQ13946 482 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 PLPPR5Q32ZL2 321 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 ARL13AQ5H913 290 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-202ENST00000337571 Q5PR19 223 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 TMEM201Q5SNT2 666 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 CCNJQ5T5M9 372 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 BHLHB9Q6PI77 547 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 PLEKHM3Q6ZWE6 761 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 MTERF4Q7Z6M4 381 aaKnown RBP9.55□□□□□ -0.88
CAPN3-202ENST00000337571 TRABD2AQ86V40 505 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 CXorf67Q86X51 503 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-202ENST00000337571 RIBC1Q8N443 379 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-202ENST00000337571 OR5P2Q8WZ92 322 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 OSTF1Q92882 214 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 CDS1Q92903 461 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 ARL8AQ96BM9 186 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 GIMAP5Q96F15 307 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 OTUB1Q96FW1 271 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-202ENST00000337571 APOPT1Q96IL0 206 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 BDH2Q9BUT1 245 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 HDHD5Q9BXW7 423 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 ACTRT3Q9BYD9 372 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 PIGUQ9H490 435 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 TMEM185BQ9H7F4 350 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 DUSP22Q9NRW4 184 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 FBXO34Q9NWN3 711 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 GIN1Q9NXP7 522 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 ATP6V1HQ9UI12 483 aa9.55□□□□□ -0.88
CAPN3-202ENST00000337571 SCAMP2O15127 329 aaKnown RBP9.54□□□□□ -0.88
CAPN3-202ENST00000337571 LYPLA1O75608 230 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-202ENST00000337571 SLU7O95391 586 aaKnown RBP9.54□□□□□ -0.88
CAPN3-202ENST00000337571 TUBBP07437 444 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 CHRNGP07510 517 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 PRPS1L1P21108 318 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 SFTPDP35247 375 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 SERPINB5P36952 375 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 NR1H2P55055 460 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 LASP1Q14847 261 aaKnown RBP9.54□□□□□ -0.88
CAPN3-202ENST00000337571 RNPS1Q15287 305 aaKnown RBP9.54□□□□□ -0.88
CAPN3-202ENST00000337571 GUSBP1Q15486 140 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 BEX5Q5H9J7 111 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 CDC73Q6P1J9 531 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 PRSS57Q6UWY2 283 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 Q71RC1 249 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-202ENST00000337571 BANPQ8N9N5 519 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 FNDC5Q8NAU1 212 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 OR7A2PQ8NGA2 310 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 OR56A1Q8NGH5 318 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 MOAP1Q96BY2 351 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 FAM120BQ96EK7 910 aaKnown RBP9.54□□□□□ -0.88
CAPN3-202ENST00000337571 PERPQ96FX8 193 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 KLHL15Q96M94 604 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 SMR3AQ99954 134 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 C12orf49Q9H741 205 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 MKS1Q9NXB0 559 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 GPR52Q9Y2T5 361 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 FLNAP21333 2647 aaKnown RBP9.54□□□□□ -0.88
CAPN3-202ENST00000337571 MTORP42345 2549 aa9.54□□□□□ -0.88
CAPN3-202ENST00000337571 A0A0J9YW62 118 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 TMEM233B4DJY2 109 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 SIAH2O43255 324 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 SPAG7O75391 227 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 PRKD3O94806 890 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 LAMP1P11279 417 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 PSMA4P25789 261 aaKnown RBP9.53□□□□□ -0.88
CAPN3-202ENST00000337571 ADH6P28332 368 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 P2RX1P51575 399 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 PRR20EP86478 221 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 PRR20CP86479 221 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 PRR20DP86480 221 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 PRR20BP86481 221 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 PRR20AP86496 221 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 MAD2L1Q13257 205 aaPredicted RBP9.53□□□□□ -0.88
CAPN3-202ENST00000337571 CTU2Q2VPK5 515 aaKnown RBP9.53□□□□□ -0.88
CAPN3-202ENST00000337571 UGT3A2Q3SY77 523 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 IL23RQ5VWK5 629 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 ALKBH2Q6NS38 261 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 YTHDF3Q7Z739 585 aaKnown RBP9.53□□□□□ -0.88
CAPN3-202ENST00000337571 ZAR1Q86SH2 424 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 WFDC8Q8IUA0 241 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 ZNF614Q8N883 585 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 LRRN4CLQ8ND94 238 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 ATP6V1C2Q8NEY4 427 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 STEAP2Q8NFT2 490 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 OR2W6PQ8NHA6 318 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 FBXO27Q8NI29 283 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 PPP1R14CQ8TAE6 165 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 TCP10LQ8TDR4 215 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 TMEM171Q8WVE6 324 aa9.53□□□□□ -0.88
CAPN3-202ENST00000337571 ROBO4Q8WZ75 1007 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms