RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 PITPNAQ00169 270 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 TCP10Q12799 353 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 NDUFA9Q16795 377 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 PLK5Q496M5 336 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 ZNF529Q6P280 563 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 PTCHD4Q6ZW05 846 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 SLC24A5Q71RS6 500 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 CD163Q86VB7 1156 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 BBS1Q8NFJ9 593 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 C1GALT1C1Q96EU7 318 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 SENP5Q96HI0 755 aaPredicted RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 TMEM47Q9BQJ4 181 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 URM1Q9BTM9 101 aaKnown RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 HEBP1Q9NRV9 189 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 ADARB2Q9NS39 739 aaKnown RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 TAS2R16Q9NYV7 291 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 SLAMF8Q9P0V8 285 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 CFAP20Q9Y6A4 193 aaKnown RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 C20orf202A1L168 122 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 FAM171A2A8MVW0 826 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 CSO75390 466 aaKnown RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 NFATC1O95644 943 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 BPIP17213 487 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 MIPP30301 263 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 AVPR1AP37288 418 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 ZNF140P52738 457 aaPredicted RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 KLF3P57682 345 aaPredicted RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 RBBP4Q09028 425 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 SNTB2Q13425 540 aaKnown RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 ATP6V1FQ16864 119 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 RNLSQ5VYX0 342 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 DLK2Q6UY11 383 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 PHYKPLQ8IUZ5 450 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 KCTD12Q96CX2 325 aaKnown RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 CSTL1Q9H114 145 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 JPH1Q9HDC5 661 aaPredicted RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 NMRK2Q9NPI5 230 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 MMP26Q9NRE1 261 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 FLRT1Q9NZU1 646 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 RCC2Q9P258 522 aaKnown RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 MINPP1Q9UNW1 487 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 LSM2Q9Y333 95 aaKnown RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 LRRC14BA6NHZ5 514 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 A6NLC8 198 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 DDNO94850 711 aaPredicted RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 CYB5R3P00387 301 aaPredicted RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 TAGLN2P37802 199 aaKnown RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 F2RL1P55085 397 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 PRPS1P60891 318 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 SMAD1Q15797 465 aaKnown RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 RNF151Q2KHN1 245 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 ZNF549Q6P9A3 640 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 TMEM135Q86UB9 458 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 BPIFB2Q8N4F0 458 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 CPNE2Q96FN4 548 aaPredicted RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 SMARCD1Q96GM5 515 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 CNN2Q99439 309 aaKnown RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 OR2AG1Q9H205 316 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 MTIF3Q9H2K0 278 aaKnown RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 FZD3Q9NPG1 666 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 IL26Q9NPH9 171 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 TLR8Q9NR97 1041 aaKnown RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 CYSLTR2Q9NS75 346 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 UBP1Q9NZI7 540 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 GSKIPQ9P0R6 139 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 TMED3Q9Y3Q3 217 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 PCDHB1Q9Y5F3 818 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 DNAJC15Q9Y5T4 150 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 CPED1A4D0V7 1026 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 GSAPA4D1B5 854 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 DVL1O14640 695 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 SMAD9O15198 467 aaKnown RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 KCNAB3O43448 404 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 KDELR3O43731 214 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 SMPD1P17405 629 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 SHC1P29353 583 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 CLK2P49760 499 aaKnown RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 GMCL1P1Q8NEA9 526 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 OR2D3Q8NGH3 330 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 OR5M3Q8NGP4 307 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 M1APQ8TC57 530 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 COA7Q96BR5 231 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 ZNF707Q96C28 371 aaPredicted RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 SLC41A3Q96GZ6 507 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 SPATA13Q96N96 652 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 NRIP2Q9BQI9 281 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 PCBD2Q9H0N5 130 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 PCED1AQ9H1Q7 454 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 GSTO2Q9H4Y5 243 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 TNFRSF12AQ9NP84 129 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 SERINC1Q9NRX5 453 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 ZNF226Q9NYT6 803 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 HACL1Q9UJ83 578 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 KPTNQ9Y664 436 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 DDX60LQ5H9U9 1706 aaKnown RBP8.06□□□□□ -1.12
TDP1-201ENST00000335725 SERTM2A0A1B0GWG4 89 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 NAP1L6A6NFF2 107 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 IFITM10A6NMD0 228 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 FAM220BPB1ANY3 271 aa8.06□□□□□ -1.12
TDP1-201ENST00000335725 EIF4E2O60573 245 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms