RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 DCST1Q5T197 706 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 LRIF1Q5T3J3 769 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 RIPPLY2Q5TAB7 128 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 NSUN5P2Q63ZY6 315 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 TYW3Q6IPR3 259 aaKnown RBP12.68□□□□□ -0.38
LIMS1-201ENST00000332345 ARSKQ6UWY0 536 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 LRRC74BQ6ZQY2 392 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 LACC1Q8IV20 430 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 RPRMLQ8N4K4 120 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 MEIOBQ8N635 442 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 TOR1AIP2Q8NFQ8 470 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 LILRB4Q8NHJ6 448 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 TRIB1Q96RU8 372 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 ZNF385DQ9H6B1 395 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 CHST11Q9NPF2 352 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.68□□□□□ -0.38
LIMS1-201ENST00000332345 CALML5Q9NZT1 146 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 P2RX2Q9UBL9 471 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 LEF1Q9UJU2 399 aaPredicted RBP12.68□□□□□ -0.38
LIMS1-201ENST00000332345 RNF6Q9Y252 685 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 VDAC3Q9Y277 283 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 SLC35A3Q9Y2D2 325 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 NDUFAF1Q9Y375 327 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 ZNF337Q9Y3M9 751 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 AP4B1Q9Y6B7 739 aa12.68□□□□□ -0.38
LIMS1-201ENST00000332345 HECTD1Q9ULT8 2610 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 OR2M5A3KFT3 312 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 PRAMEF27A3QJZ7 478 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 HSPB2A8KAH6 182 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 PRSS44E7EML9 344 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 CSTAP01040 98 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 IL2RAP01589 272 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 SNRPB2P08579 225 aaKnown RBP12.67□□□□□ -0.38
LIMS1-201ENST00000332345 UBL4AP11441 157 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 ETFAP13804 333 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 ZNF17P17021 662 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 POU3F2P20265 443 aaPredicted RBP12.67□□□□□ -0.38
LIMS1-201ENST00000332345 CAPN3P20807 821 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 MVDP53602 400 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 DSTNP60981 165 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 ZNF117Q03924 483 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 FUT5Q11128 374 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 FADDQ13158 208 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 RGNQ15493 299 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 HSPB2Q16082 182 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 TMEM44Q2T9K0 475 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 GTDC1Q4AE62 458 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 PAGE3Q5JUK9 113 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 FRRS1Q6ZNA5 592 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 GTPBP8Q8N3Z3 284 aaPredicted RBP12.67□□□□□ -0.38
LIMS1-201ENST00000332345 ANKFN1Q8N957 763 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 OR5M1Q8NGP8 315 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 OR5W2Q8NH69 310 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 AURKBQ96GD4 344 aaPredicted RBP12.67□□□□□ -0.38
LIMS1-201ENST00000332345 ZNF317Q96PQ6 595 aaPredicted RBP12.67□□□□□ -0.38
LIMS1-201ENST00000332345 LAT2Q9GZY6 243 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 MED17Q9NVC6 651 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 KLHL14Q9P2G3 628 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 KCNE5Q9UJ90 142 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 ICAM5Q9UMF0 924 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 HEATR5AQ86XA9 2040 aa12.67□□□□□ -0.38
LIMS1-201ENST00000332345 UTP20O75691 2785 aaKnown RBP12.67□□□□□ -0.38
LIMS1-201ENST00000332345 C7orf72A4D263 438 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 EVPLLA8MZ36 301 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 H3BML4 177 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 ANGPT2O15123 496 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 TNFRSF21O75509 655 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 CYP7B1O75881 506 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 TFPTP0C1Z6 253 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 IL7RP16871 459 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 ZNF708P17019 499 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 ADH6P28332 368 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 HTR1EP28566 365 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 RNF144AP50876 292 aaPredicted RBP12.66□□□□□ -0.38
LIMS1-201ENST00000332345 CLDN18P56856 261 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 KCNJ10P78508 379 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 SF3A3Q12874 501 aaKnown RBP eCLIP12.66□□□□□ -0.38
LIMS1-201ENST00000332345 CBFBQ13951 182 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 MAPK14Q16539 360 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 PLPPR5Q32ZL2 321 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 SP5Q6BEB4 398 aaPredicted RBP12.66□□□□□ -0.38
LIMS1-201ENST00000332345 CGB2Q6NT52 195 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 CBLN3Q6UW01 205 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 OLIG3Q7RTU3 272 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 CCDC71Q8IV32 467 aaPredicted RBP12.66□□□□□ -0.38
LIMS1-201ENST00000332345 PEX5LQ8IYB4 626 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 UBQLNLQ8IYU4 475 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 TMCO5AQ8N6Q1 288 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 GPR119Q8TDV5 335 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 ZG16BQ96DA0 208 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 ARSGQ96EG1 525 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 UCN2Q96RP3 112 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 TUBA1CQ9BQE3 449 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 SLC38A1Q9H2H9 487 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 OCEL1Q9H607 264 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 KCNJ16Q9NPI9 418 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 SLAMF8Q9P0V8 285 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 ZNF232Q9UNY5 417 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 CORO2BQ9UQ03 480 aa12.66□□□□□ -0.38
LIMS1-201ENST00000332345 GPC6Q9Y625 555 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms