RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 TMEM201Q5SNT2 666 aa22.35■■□□□ 1.17
PPP4R4-202ENST00000328839 LRRN4CLQ8ND94 238 aa22.35■■□□□ 1.17
PPP4R4-202ENST00000328839 KIF18AQ8NI77 898 aa22.35■■□□□ 1.17
PPP4R4-202ENST00000328839 ABHD3Q8WU67 409 aa22.35■■□□□ 1.17
PPP4R4-202ENST00000328839 CDS1Q92903 461 aa22.35■■□□□ 1.17
PPP4R4-202ENST00000328839 FAM120BQ96EK7 910 aaKnown RBP22.35■■□□□ 1.17
PPP4R4-202ENST00000328839 TACO1Q9BSH4 297 aaKnown RBP22.35■■□□□ 1.17
PPP4R4-202ENST00000328839 BTBD2Q9BX70 525 aa22.35■■□□□ 1.17
PPP4R4-202ENST00000328839 GIN1Q9NXP7 522 aa22.35■■□□□ 1.17
PPP4R4-202ENST00000328839 MID2Q9UJV3 735 aa22.35■■□□□ 1.17
PPP4R4-202ENST00000328839 TMED5Q9Y3A6 229 aa22.35■■□□□ 1.17
PPP4R4-202ENST00000328839 HIVEP2P31629 2446 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 HSPA4LO95757 839 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 HMGN2P05204 90 aaKnown RBP22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 LINGO3P0C6S8 592 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 PABPC4LP0CB38 370 aaKnown RBP22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 PSMB1P20618 241 aaKnown RBP22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 ATP6V1C1P21283 382 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 HPCAL1P37235 193 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 EIF1P41567 113 aaKnown RBP22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 ZNF117Q03924 483 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 ZNF239Q16600 458 aaKnown RBP22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 KANK2Q63ZY3 851 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 R3HCC1LQ7Z5L2 792 aaKnown RBP22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 ZNF611Q8N823 705 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 EPS8L3Q8TE67 593 aaKnown RBP22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 IGFBPL1Q8WX77 278 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 AKAP1Q92667 903 aaKnown RBP eCLIP22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 S100PBPQ96BU1 408 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 MTERF3Q96E29 417 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 GATA5Q9BWX5 397 aaPredicted RBP22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 TIGARQ9NQ88 270 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 LAMP3Q9UQV4 416 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 DNAJC15Q9Y5T4 150 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 DNHD1Q96M86 4753 aa22.34■■□□□ 1.17
PPP4R4-202ENST00000328839 JMJD1CQ15652 2540 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 NPIPA5A0A0B4J1W7 369 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 KIAA1324LA8MWY0 1029 aaPredicted RBP22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 NPIPA7E9PJI5 369 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 KIF2AO00139 706 aaPredicted RBP22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 NPIPA8P0DM63 369 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 BCKDHAP12694 445 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 DDX5P17844 614 aaKnown RBP22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 ZNF844Q08AG5 666 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 PCLAFQ15004 111 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 TSC22D1Q15714 1073 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 LRIG3Q6UXM1 1119 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 ATP6V1C2Q8NEY4 427 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 STEAP2Q8NFT2 490 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 RNF128Q8TEB7 428 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 CPNE4Q96A23 557 aaPredicted RBP22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 SRXN1Q9BYN0 137 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 OR10A4Q9H209 315 aa22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 SIRT3Q9NTG7 399 aaPredicted RBP22.33■■□□□ 1.17
PPP4R4-202ENST00000328839 FREM1Q5H8C1 2179 aa22.33■■□□□ 1.16
PPP4R4-202ENST00000328839 ZANQ9Y493 2812 aa22.33■■□□□ 1.16
PPP4R4-202ENST00000328839 NUP214P35658 2090 aaPredicted RBP22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 TMEM233B4DJY2 109 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 TRIM13O60858 407 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 NTN1O95631 604 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 NID1P14543 1247 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 PAX1P15863 534 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 IL32P24001 234 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 ELK4P28324 431 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 TP53BP2Q13625 1128 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 RNF165Q6ZSG1 346 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 TUSC5Q8IXB3 177 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 ZNF527Q8NB42 609 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 OR7A2PQ8NGA2 310 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 FBXO27Q8NI29 283 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 RAB3IL1Q8TBN0 382 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 TWIST2Q8WVJ9 160 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 STACQ99469 402 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 TMEM204Q9BSN7 226 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 TRMOQ9BU70 441 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 DUSP22Q9NRW4 184 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 ZNF701Q9NV72 531 aaPredicted RBP22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 GIMAP2Q9UG22 337 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 CARD8Q9Y2G2 431 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 CSPG4Q6UVK1 2322 aa22.32■■□□□ 1.16
PPP4R4-202ENST00000328839 TMEM114B3SHH9 223 aa22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 SCAMP2O15127 329 aaKnown RBP22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 CLOCKO15516 846 aa22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 CAPRIN1Q14444 709 aaKnown RBP22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 RNPS1Q15287 305 aaKnown RBP22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 CBLN3Q6UW01 205 aa22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 TFAP2EQ6VUC0 442 aa22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 NUFIP2Q7Z417 695 aaKnown RBP22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 MTERF4Q7Z6M4 381 aaKnown RBP22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 ZNF619Q8N2I2 560 aa22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 ZNF614Q8N883 585 aa22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 AGR3Q8TD06 166 aa22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 PIGUQ9H490 435 aa22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 PPCSQ9HAB8 311 aa22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 KLHL13Q9P2N7 655 aa22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 RNF115Q9Y4L5 304 aa22.31■■□□□ 1.16
PPP4R4-202ENST00000328839 GJE1A6NN92 205 aa22.3■■□□□ 1.16
PPP4R4-202ENST00000328839 H3BNH8 94 aa22.3■■□□□ 1.16
PPP4R4-202ENST00000328839 GTPBP1O00178 669 aaKnown RBP22.3■■□□□ 1.16
PPP4R4-202ENST00000328839 ZNF195O14628 629 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms