RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ZNF227Q86WZ6 799 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 COMMD2Q86X83 199 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 SIAH3Q8IW03 269 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 OR8K3Q8NH51 312 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 BPIFA2Q96DR5 249 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 MSLNLQ96KJ4 702 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 SLC25A19Q9HC21 320 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 USP36Q9P275 1121 aaKnown RBP11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 FBXL21Q9UKT6 434 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 ICKQ9UPZ9 632 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 BLOC1S5-TXNDC5H3BN57 136 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 FKTNO75072 461 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 UBL3O95164 117 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 AIFM1O95831 613 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 EPCAMP16422 314 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 ADAM8P78325 824 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 ENPP2Q13822 863 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 DECR1Q16698 335 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 YIF1BQ5BJH7 314 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 NKAIN4Q8IVV8 208 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 SERPINA12Q8IW75 414 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 NLGN4YQ8NFZ3 816 aaPredicted RBP11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 OR5K2Q8NHB8 316 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 ABHD4Q8TB40 342 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 FCRL1Q96LA6 429 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 SLC7A5P2Q9GIP4 190 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 UBQLN3Q9H347 655 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 SEMA4GQ9NTN9 838 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 PLEKHB1Q9UF11 243 aaPredicted RBP11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 NDOR1Q9UHB4 597 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 RCE1Q9Y256 329 aa11.92□□□□□ -0.5
DNMT3A-202ENST00000321117 KANTRA0A1W2PQU2 76 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 SBF1O95248 1867 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 CTSAP10619 480 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 REEP5Q00765 189 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 CCNJQ5T5M9 372 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 FAM69AQ5T7M9 428 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 CD276Q5ZPR3 534 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 KIAA1324Q6UXG2 1013 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 CNTRLQ7Z7A1 2325 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 DCLRE1CQ96SD1 692 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 CHST8Q9H2A9 424 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 FBXO9Q9UK97 447 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 SH2B3Q9UQQ2 575 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 ZNF443Q9Y2A4 671 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 POLR1DQ9Y2S0 133 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 ARPC5O15511 151 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 APOC3P02656 99 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 IFNA6P05013 189 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 CTSEP14091 401 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 GRPRP30550 384 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 FGF9P31371 208 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 IRS1P35568 1242 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 SRP9P49458 86 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 CCR6P51684 374 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 GALK2Q01415 458 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 ZNF750Q32MQ0 723 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 C3P1Q6ZMU1 363 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 TMEM255BQ8WV15 326 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 GHSRQ92847 366 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 SGIP1Q9BQI5 828 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 TRIM2Q9C040 744 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 ZDHHC5Q9C0B5 715 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 HINT3Q9NQE9 182 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 A4GNTQ9UNA3 340 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 SLC35A3Q9Y2D2 325 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 PPIL1Q9Y3C6 166 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 NEUROG3Q9Y4Z2 214 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 NAP1L6A6NFF2 107 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 K7ESM1 405 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 PEX14O75381 377 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 SOD1P00441 154 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 GABRB1P18505 474 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 PXNP49023 591 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 HNRNPA1L2Q32P51 320 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 SIGIRRQ6IA17 410 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 RNF31Q96EP0 1072 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 SAMD11Q96NU1 681 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 ATF6BQ99941 703 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 PLA2G12AQ9BZM1 189 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 ACOXLQ9NUZ1 547 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 SIDT1Q9NXL6 827 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 DNMT3BQ9UBC3 853 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 TDRD15B5MCY1 1934 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 NPIPA5A0A0B4J1W7 369 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 OR52A4PA6NMU1 304 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 GRXCR1A8MXD5 290 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 NPIPA7E9PJI5 369 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 NPIPA8P0DM63 369 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 PGDP52209 483 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 ART1P52961 327 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 DEFB115Q30KQ5 88 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 ALG10BQ5I7T1 473 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 ENPP7Q6UWV6 458 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 ZNF627Q7L945 461 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 MIXL1Q9H2W2 232 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 ANKRD19PQ9H560 264 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 IL21Q9HBE4 155 aa11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 RABL2AQ9UBK7 228 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-202ENST00000321117 RABL2BQ9UNT1 228 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms