RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 PRKCDQ05655 676 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 RAB39AQ14964 217 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 SMN1Q16637 294 aaKnown RBP16.43■□□□□ 0.22
RAB39A-201ENST00000320578 TMEM236Q5W0B7 351 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 GTF2IRD2BQ6EKJ0 949 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 TCEAL6Q6IPX3 200 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 MRPL14Q6P1L8 145 aaKnown RBP16.43■□□□□ 0.22
RAB39A-201ENST00000320578 GTF2IRD2Q86UP8 949 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 NRMQ8IXM6 262 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 PRSS58Q8IYP2 241 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 NLGN4XQ8N0W4 816 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 POGLUT1Q8NBL1 392 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 OR13F1Q8NGS4 319 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 TMEM255BQ8WV15 326 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 TMEM239Q8WW34 195 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 METTL21AQ8WXB1 218 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 TCEAL3Q969E4 200 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 MYDGFQ969H8 173 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 ZNF426Q9BUY5 554 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 POLDIP3Q9BY77 421 aaKnown RBP16.43■□□□□ 0.22
RAB39A-201ENST00000320578 APMAPQ9HDC9 416 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 CLN6Q9NWW5 311 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 IL20Q9NYY1 176 aa16.43■□□□□ 0.22
RAB39A-201ENST00000320578 SAGE2PA6NJ88 616 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 SOX14O95416 240 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 CSTAP01040 98 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 EMP2P54851 167 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 CTBP2P56545 445 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 EFNB1P98172 346 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 NNATQ16517 81 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 OCLNQ16625 522 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 TMEM205Q6UW68 189 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 LINC00114Q6XXX2 140 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 SLC34A3Q8N130 599 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 ZNF614Q8N883 585 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 NFAM1Q8NET5 270 aaPredicted RBP16.42■□□□□ 0.22
RAB39A-201ENST00000320578 SGCDQ92629 289 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 OSTF1Q92882 214 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 MUL1Q969V5 352 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 CNOT2Q9NZN8 540 aaKnown RBP16.42■□□□□ 0.22
RAB39A-201ENST00000320578 ERVK-18Q9QC07 812 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 AASSQ9UDR5 926 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 RSL24D1Q9UHA3 163 aaKnown RBP16.42■□□□□ 0.22
RAB39A-201ENST00000320578 COMMD3-BMI1R4GMX3 469 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 A0A1W2PQD3 144 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 HTR3EA5X5Y0 456 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 GINS1Q14691 196 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 ULK3Q6PHR2 472 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 LANCL3Q6ZV70 420 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 TMPRSS11FQ6ZWK6 438 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 KIF18BQ86Y91 864 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 FAM26EQ8N5C1 309 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 B3GNT7Q8NFL0 401 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 OR8K3Q8NH51 312 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 TEX47Q8TBZ9 253 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 FAM46AQ96IP4 442 aaKnown RBP16.42■□□□□ 0.22
RAB39A-201ENST00000320578 SPSB2Q99619 263 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 PRRG3Q9BZD7 231 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 FER1L5A0AVI2 2057 aa16.42■□□□□ 0.22
RAB39A-201ENST00000320578 A0A1B0GWA3 101 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 EFCAB10A6NFE3 127 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 TMX2-CTNND1H3BSU7 103 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 SCDO00767 359 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 TSPAN2O60636 221 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 UTS2O95399 124 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 PIPP12273 146 aaPredicted RBP16.41■□□□□ 0.22
RAB39A-201ENST00000320578 PNLIPRP2P54317 469 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 SH3BGRP55822 239 aaPredicted RBP16.41■□□□□ 0.22
RAB39A-201ENST00000320578 EMX1Q04741 257 aaPredicted RBP16.41■□□□□ 0.22
RAB39A-201ENST00000320578 NEDD8Q15843 81 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 MEDAGQ5VYS4 303 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 SLC27A4Q6P1M0 643 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 PRR23CQ6ZRP0 262 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 SLCO6A1Q86UG4 719 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 DNAJA4Q8WW22 397 aaPredicted RBP16.41■□□□□ 0.22
RAB39A-201ENST00000320578 GGHQ92820 318 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 EFHD2Q96C19 240 aaPredicted RBP16.41■□□□□ 0.22
RAB39A-201ENST00000320578 FLRT3Q9NZU0 649 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 AKAP7Q9P0M2 348 aaPredicted RBP16.41■□□□□ 0.22
RAB39A-201ENST00000320578 C19orf25Q9UFG5 118 aaPredicted RBP16.41■□□□□ 0.22
RAB39A-201ENST00000320578 MED31Q9Y3C7 131 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 CDH10Q9Y6N8 788 aa16.41■□□□□ 0.22
RAB39A-201ENST00000320578 LAMA1P25391 3075 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 IGFBP1P08833 259 aaPredicted RBP16.4■□□□□ 0.22
RAB39A-201ENST00000320578 ZNF806P0C7X5 589 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 DCKP27707 260 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 PCYT1AP49585 367 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 RPL13AP3Q6NVV1 102 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 WDR88Q6ZMY6 472 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 CDK20Q8IZL9 346 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 SLC43A2Q8N370 569 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 NUBPLQ8TB37 319 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 DOK1Q99704 481 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 COPS4Q9BT78 406 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 TEX12Q9BXU0 123 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 C11orf16Q9NQ32 467 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 CDK1P06493 297 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 KLK3P07288 261 aaPredicted RBP16.4■□□□□ 0.22
RAB39A-201ENST00000320578 ATXN8OSP0DMR3 200 aa16.4■□□□□ 0.22
RAB39A-201ENST00000320578 CD59P13987 128 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms