RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 FAM46CQ5VWP2 391 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 DMKNQ6E0U4 476 aaPredicted RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 HIST3H2AQ7L7L0 130 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 TMCO2Q7Z6W1 182 aaPredicted RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 DCUN1D3Q8IWE4 304 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 POMGNT2Q8NAT1 580 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 C1orf216Q8TAB5 229 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 THEM6Q8WUY1 208 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 FCAMRQ8WWV6 532 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 HIST1H2ACQ93077 130 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 MS4A8Q9BY19 250 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 REG4Q9BYZ8 158 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 ABCG4Q9H172 646 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 POLMQ9NP87 494 aaPredicted RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 COPS3Q9UNS2 423 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 RCE1Q9Y256 329 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 TSC2P49815 1807 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 EMC8O43402 210 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 GALR3O60755 368 aaPredicted RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 FMO6PO60774 539 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 CLEC3AO75596 197 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 CSF1P09603 554 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 DRD5P21918 477 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 TAS2R38P59533 333 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 CRYZQ08257 329 aaKnown RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SREBF2Q12772 1141 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 HLXQ14774 488 aaPredicted RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 RTP2Q5QGT7 225 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM220Q6QAJ8 160 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF765Q7L2R6 523 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SHFQ7M4L6 423 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SZRD1Q7Z422 152 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 NRMQ8IXM6 262 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SVBPQ8N300 66 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 HDDC3Q8N4P3 179 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ADAMTS15Q8TE58 950 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 TM4SF18Q96CE8 201 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ART5Q96L15 291 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 HS6ST2Q96MM7 605 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 OR14I1A6ND48 311 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 PRSS44E7EML9 344 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 KLF4O43474 513 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 DDNO94850 711 aaPredicted RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 NDUFB6O95139 128 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 EPXP11678 715 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SOX18P35713 384 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 GJA5P36382 358 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SSR2P43308 183 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 EPHB3P54753 998 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 PRMT2P55345 433 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 PLD1Q13393 1074 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 CLLU1OSQ5K130 101 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SHEQ5VZ18 495 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ZC3H14Q6PJT7 736 aaKnown RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 GDPD4Q6W3E5 623 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 NRSN1Q8IZ57 195 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 OR1M1Q8NGA1 313 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ZDHHC1Q8WTX9 485 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 OR52D1Q9H346 318 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 HRASLSQ9HDD0 168 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 NRIP3Q9NQ35 241 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SIDT1Q9NXL6 827 aaKnown RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 A0A0G2JK05 382 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 LANCL1O43813 399 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 DNAJB6O75190 326 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 PTP4A3O75365 173 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SBK2P0C263 348 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 RPA2P15927 270 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 HTR2AP28223 471 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 TSFMP43897 325 aaKnown RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 PREPP48147 710 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SF1Q15637 639 aaKnown RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF626Q68DY1 528 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SFRP4Q6FHJ7 346 aaPredicted RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 SLC25A25Q6KCM7 469 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 WDR53Q7Z5U6 358 aaPredicted RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 FAM129CQ86XR2 697 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 OR11G2Q8NGC1 345 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 TNFAIP8L1Q8WVP5 186 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ATOH1Q92858 354 aaPredicted RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF649Q9BS31 505 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 POTEKPQ9BYX7 375 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ZDHHC6Q9H6R6 413 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 CMC2Q9NRP2 79 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ACTR10Q9NZ32 417 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 OPN4Q9UHM6 478 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 B4GALT3O60512 393 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 HMGN2P05204 90 aaKnown RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 OMPP47874 163 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 CTSCP53634 463 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 KIAA1024LP59773 190 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM115Q12893 351 aaPredicted RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 RBMS2Q15434 407 aaKnown RBP4.46□□□□□ -1.7
PTPN13-201ENST00000316707 HTR3DQ70Z44 454 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 TMUB2Q71RG4 321 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF687Q8N1G0 1237 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 HAVCR1Q96D42 359 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 EGLN3Q9H6Z9 239 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 ETV7Q9Y603 341 aa4.46□□□□□ -1.7
PTPN13-201ENST00000316707 TBC1D3KA0A087X1G2 549 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms