RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PRODH2Q9UF12 536 aa16.95■□□□□ 0.3
CCDC43-201ENST00000315286 HEATR5AQ86XA9 2040 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 A0A0B4J2E0 115 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 A0A1B0GWA3 101 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 A0A1B0GX12 115 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 UNC119BA6NIH7 251 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 SURF4O15260 269 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 CLK1P49759 484 aaKnown RBP16.94■□□□□ 0.3
CCDC43-201ENST00000315286 DSG2Q14126 1118 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 VWA2Q5GFL6 755 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 C1orf189Q5VU69 101 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 TMPRSS9Q7Z410 1059 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 KMT5CQ86Y97 462 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 TMEM151BQ8IW70 566 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 CLDN22Q8N7P3 220 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 ANKK1Q8NFD2 765 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 OR7G1Q8NGA0 311 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 ZNF501Q96CX3 271 aaPredicted RBP16.94■□□□□ 0.3
CCDC43-201ENST00000315286 LMF1Q96S06 567 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 OR51E2Q9H255 320 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 HHATLQ9HCP6 504 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 ZNF304Q9HCX3 659 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 FGF21Q9NSA1 209 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 SIDT1Q9NXL6 827 aaKnown RBP16.94■□□□□ 0.3
CCDC43-201ENST00000315286 ATXN7L1Q9ULK2 861 aaPredicted RBP16.94■□□□□ 0.3
CCDC43-201ENST00000315286 ERGIC3Q9Y282 383 aa16.94■□□□□ 0.3
CCDC43-201ENST00000315286 LSM2Q9Y333 95 aaKnown RBP16.94■□□□□ 0.3
CCDC43-201ENST00000315286 TNRC6BQ9UPQ9 1833 aaKnown RBP16.94■□□□□ 0.3
CCDC43-201ENST00000315286 IGKV3D-11A0A0A0MRZ8 115 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 PRODHO43272 600 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 ZGLP1P0C6A0 271 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 GAS1P54826 345 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 SLC37A1P57057 533 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 RHAGQ02094 409 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 TSTQ16762 297 aaKnown RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 PGGHGQ32M88 737 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 PAQR6Q6TCH4 344 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 HSDL2Q6YN16 418 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 QSOX2Q6ZRP7 698 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 MAFAQ8NHW3 353 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 RNF31Q96EP0 1072 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 DPYSL5Q9BPU6 564 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 PRRG3Q9BZD7 231 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 ZNF768Q9H5H4 540 aaKnown RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 MEPEQ9NQ76 525 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 PILRBQ9UKJ0 227 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 PMF1-BGLAPU3KQ54 211 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 VPS13AQ96RL7 3174 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 ADAMTS20P59510 1910 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 MUC3AQ02505 3323 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 CPED1A4D0V7 1026 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 TTC36A6NLP5 189 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 CSO75390 466 aaKnown RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 NADKO95544 446 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 RPLP0P05388 317 aaKnown RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 MSL3P1P0C860 447 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 TDGF1P13385 188 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 FBLP22087 321 aaKnown RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 FXYD6P3P58550 94 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 NDUFAF6Q330K2 333 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 ZNF829Q3KNS6 432 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 SOWAHCQ53LP3 525 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 RNLSQ5VYX0 342 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 ZNF574Q6ZN55 896 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 WDR5BQ86VZ2 330 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 NANOGP1Q8N7R0 232 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 OR2T33Q8NG76 320 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 BPIFA2Q96DR5 249 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 ZHX1-C8orf76Q96EF9 292 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 OR8D2Q9GZM6 311 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 ENKD1Q9H0I2 346 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 OR52D1Q9H346 318 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 UBQLN3Q9H347 655 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 ZBTB20Q9HC78 741 aaPredicted RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 DIMT1Q9UNQ2 313 aaKnown RBP16.93■□□□□ 0.3
CCDC43-201ENST00000315286 MED31Q9Y3C7 131 aa16.93■□□□□ 0.3
CCDC43-201ENST00000315286 A0A1B0GTQ1 180 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 KDM4EB2RXH2 506 aaPredicted RBP16.92■□□□□ 0.3
CCDC43-201ENST00000315286 DSCR3O14972 297 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 CHP2O43745 196 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 RFPL3O75679 317 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 APOL3O95236 402 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 SLC2A10O95528 541 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 PSMD4P55036 377 aaKnown RBP16.92■□□□□ 0.3
CCDC43-201ENST00000315286 DGUOKQ16854 277 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.92■□□□□ 0.3
CCDC43-201ENST00000315286 GUSBP11Q6P575 273 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 CYP4Z2PQ8N1L4 340 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 ASCC3Q8N3C0 2202 aaKnown RBP16.92■□□□□ 0.3
CCDC43-201ENST00000315286 LSMEM1Q8N8F7 131 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 BRIX1Q8TDN6 353 aaKnown RBP16.92■□□□□ 0.3
CCDC43-201ENST00000315286 EFHD2Q96C19 240 aaPredicted RBP16.92■□□□□ 0.3
CCDC43-201ENST00000315286 RNFT2Q96EX2 444 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 OPALINQ96PE5 141 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 TEX12Q9BXU0 123 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 TRIM2Q9C040 744 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 MRPS18AQ9NVS2 196 aaKnown RBP16.92■□□□□ 0.3
CCDC43-201ENST00000315286 CLCA3PQ9Y6N3 262 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 LOC100506127A0A0U1RQW1 187 aa16.92■□□□□ 0.3
CCDC43-201ENST00000315286 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms