RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 PTBP1P26599 531 aaKnown RBP eCLIP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 SLC6A1P30531 599 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 RFX3P48380 749 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 MTNR1BP49286 362 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 FCN2Q15485 313 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 SMUG1Q53HV7 270 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 PRPF38BQ5VTL8 546 aaKnown RBP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 MEPCEQ7L2J0 689 aaKnown RBP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 CEACAM19Q7Z692 300 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 LRRC28Q86X40 367 aaPredicted RBP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 LIX1LQ8IVB5 337 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 SHISA5Q8N114 240 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 SRFBP1Q8NEF9 429 aaKnown RBP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 C17orf47Q8NEP4 570 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 OR5H6Q8NGV6 325 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 ACOT12Q8WYK0 555 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 CREB3L1Q96BA8 519 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 ABHD1Q96SE0 405 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 MTHFD2LQ9H903 347 aaPredicted RBP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 PHPT1Q9NRX4 125 aaPredicted RBP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 CYSLTR2Q9NS75 346 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 FBXL4Q9UKA2 621 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 NCKAP1Q9Y2A7 1128 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 TRBV23OR9-2A0A075B6M9 112 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 DUXAA6NLW8 204 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 J3QRE1 110 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 DNAJB6O75190 326 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 HNRNPA1P09651 372 aaKnown RBP eCLIP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 NOS3P29474 1203 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 ZNF136P52737 540 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 HTRA4P83105 476 aaPredicted RBP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 DEFB134Q4QY38 66 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 SFXN4Q6P4A7 337 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 THSD4Q6ZMP0 1018 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 SYT9Q86SS6 491 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 GID4Q8IVV7 300 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 LRRC25Q8N386 305 aaPredicted RBP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 OR13C5Q8NGS8 318 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 OR51A7Q8NH64 312 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 IFT27Q9BW83 186 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 GTPBP2Q9BX10 602 aaKnown RBP11.79□□□□□ -0.52
TNIP1-201ENST00000315050 C1QTNF2Q9BXJ5 285 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 FBXO34Q9NWN3 711 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 SLC23A1Q9UHI7 598 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 ZNF222Q9UK12 451 aa11.79□□□□□ -0.52
TNIP1-201ENST00000315050 KIAA0100Q14667 2235 aaKnown RBP11.78□□□□□ -0.52
TNIP1-201ENST00000315050 TRAV27A0A087WT01 109 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 ZNF860A6NHJ4 632 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 HTR2AP28223 471 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 CMPK1P30085 196 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 ACSL1P33121 698 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 PITPNBP48739 271 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 CST6Q15828 149 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 NTRK2Q16620 822 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 SLC25A35Q3KQZ1 300 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 TRMT12Q53H54 448 aaKnown RBP11.78□□□□□ -0.52
TNIP1-201ENST00000315050 ANKRD54Q6NXT1 300 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 PSRC1Q6PGN9 363 aaPredicted RBP11.78□□□□□ -0.52
TNIP1-201ENST00000315050 OR13C2Q8NGS9 318 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 TRMT10AQ8TBZ6 339 aaKnown RBP11.78□□□□□ -0.52
TNIP1-201ENST00000315050 C4orf36Q96KX1 117 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 MS4A4EQ96PG1 132 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 PRSS27Q9BQR3 290 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 RAB11FIP5Q9BXF6 653 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 MED28Q9H204 178 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 CAPN10Q9HC96 672 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 KRCC1Q9NPI7 259 aaPredicted RBP11.78□□□□□ -0.52
TNIP1-201ENST00000315050 A0A0B4J203 849 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 PEX12O00623 359 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 PRICKLE3O43900 615 aaPredicted RBP11.78□□□□□ -0.52
TNIP1-201ENST00000315050 CEACAM5P06731 702 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 CD3GP09693 182 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 OR12D2P58182 307 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 MRPL2Q5T653 305 aaKnown RBP11.78□□□□□ -0.52
TNIP1-201ENST00000315050 BICRALQ6AI39 1079 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 HEPHL1Q6MZM0 1159 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 MTFR2Q6P444 385 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 VITQ6UXI7 678 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 TMEFF1Q8IYR6 380 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 OR8H1Q8NGG4 311 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 TMEM239Q8WW34 195 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 PTP4A1Q93096 173 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 DACT3Q96B18 629 aaPredicted RBP11.78□□□□□ -0.52
TNIP1-201ENST00000315050 PAWRQ96IZ0 340 aaKnown RBP11.78□□□□□ -0.52
TNIP1-201ENST00000315050 HS6ST2Q96MM7 605 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 ZFP3Q96NJ6 502 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 NDC1Q9BTX1 674 aa11.78□□□□□ -0.52
TNIP1-201ENST00000315050 SLC9B1P1A6NJY1 282 aa11.77□□□□□ -0.53
TNIP1-201ENST00000315050 PRR23D1E9PI22 279 aaPredicted RBP11.77□□□□□ -0.53
TNIP1-201ENST00000315050 BHLHE40O14503 412 aa11.77□□□□□ -0.53
TNIP1-201ENST00000315050 MAGEB4O15481 346 aaPredicted RBP11.77□□□□□ -0.53
TNIP1-201ENST00000315050 CHP2O43745 196 aa11.77□□□□□ -0.53
TNIP1-201ENST00000315050 SYPP08247 313 aa11.77□□□□□ -0.53
TNIP1-201ENST00000315050 PRR23D2P0DMB1 279 aaPredicted RBP11.77□□□□□ -0.53
TNIP1-201ENST00000315050 F8A1P23610 371 aa11.77□□□□□ -0.53
TNIP1-201ENST00000315050 THBS2P35442 1172 aa11.77□□□□□ -0.53
TNIP1-201ENST00000315050 P2RX3P56373 397 aa11.77□□□□□ -0.53
TNIP1-201ENST00000315050 RPE65Q16518 533 aa11.77□□□□□ -0.53
TNIP1-201ENST00000315050 PLA1AQ53H76 456 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 548.3 ms