RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 SNRPGP62308 76 aaKnown RBP15.4■□□□□ 0.06
CLCF1-201ENST00000312438 CDK5Q00535 292 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 PIGFQ07326 219 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 GINS1Q14691 196 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 NEDD8Q15843 81 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 LCN10Q6JVE6 187 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 B3GNT7Q8NFL0 401 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 RNF217Q8TC41 542 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 SPSB2Q99619 263 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 SEMA4CQ9C0C4 833 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 CLN6Q9NWW5 311 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 CNIH4Q9P003 139 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 ERVK-18Q9QC07 812 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 PPIEQ9UNP9 301 aaKnown RBP15.4■□□□□ 0.06
CLCF1-201ENST00000312438 ADAMTS20P59510 1910 aa15.4■□□□□ 0.06
CLCF1-201ENST00000312438 BDP1A6H8Y1 2624 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 IGHV3-20A0A0C4DH32 117 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 SAGE2PA6NJ88 616 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 B4E171 279 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 RGS10O43665 173 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 CHP2O43745 196 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 GDF9O60383 454 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 ADAM11O75078 769 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 UTS2O95399 124 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 SLC5A2P31639 672 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 TSPAN7P41732 249 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 SMSP52788 366 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 CNPY1Q3B7I2 92 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 XAF1Q6GPH4 301 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 CDK20Q8IZL9 346 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 ZNF441Q8N8Z8 693 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 TP53INP1Q96A56 240 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 MPP4Q96JB8 637 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 Q96MT0 163 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 ADOQ96SZ5 270 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 NRSN2Q9GZP1 204 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 WDR54Q9H977 334 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 C11orf16Q9NQ32 467 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 SLC39A1Q9NY26 324 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 FLRT3Q9NZU0 649 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 PSORS1C1Q9UIG5 152 aa15.39■□□□□ 0.05
CLCF1-201ENST00000312438 NXT1Q9UKK6 140 aaKnown RBP15.39■□□□□ 0.05
CLCF1-201ENST00000312438 A0A1B0GWA3 101 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 CLCA1A8K7I4 914 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 CNOT3O75175 753 aaKnown RBP15.38■□□□□ 0.05
CLCF1-201ENST00000312438 ZNF28P17035 718 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 IL12BP29460 328 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 RNF4P78317 190 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 RAB39AQ14964 217 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 ULK3Q6PHR2 472 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 TMEM205Q6UW68 189 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 HSDL2Q6YN16 418 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 WDR88Q6ZMY6 472 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 PRSS48Q7RTY5 328 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 MEX3DQ86XN8 651 aaKnown RBP15.38■□□□□ 0.05
CLCF1-201ENST00000312438 KIF18BQ86Y91 864 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 SLC34A3Q8N130 599 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 NFAM1Q8NET5 270 aaPredicted RBP15.38■□□□□ 0.05
CLCF1-201ENST00000312438 OR8J1Q8NGP2 316 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 TEX47Q8TBZ9 253 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 OSTF1Q92882 214 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 MYDGFQ969H8 173 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 CRB3Q9BUF7 120 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 AKIRIN1Q9H9L7 192 aaPredicted RBP15.38■□□□□ 0.05
CLCF1-201ENST00000312438 IL20Q9NYY1 176 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 RPS6KB2Q9UBS0 482 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 C19orf25Q9UFG5 118 aaPredicted RBP15.38■□□□□ 0.05
CLCF1-201ENST00000312438 GPN3Q9UHW5 284 aaPredicted RBP15.38■□□□□ 0.05
CLCF1-201ENST00000312438 ZNF223Q9UK11 482 aaPredicted RBP15.38■□□□□ 0.05
CLCF1-201ENST00000312438 MED31Q9Y3C7 131 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 NCOR1O75376 2440 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 CDC14CA4D256 554 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 TSPAN2O60636 221 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 PCMT1P22061 227 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 PNLIPRP2P54317 469 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 COPZ1P61923 177 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 E2F1Q01094 437 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 EMX1Q04741 257 aaPredicted RBP15.38■□□□□ 0.05
CLCF1-201ENST00000312438 PRKCDQ05655 676 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 TUBA3CQ13748 450 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 SF3A2Q15428 464 aaKnown RBP15.38■□□□□ 0.05
CLCF1-201ENST00000312438 FNDC7Q5VTL7 733 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 SLC27A4Q6P1M0 643 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 CPEB2Q7Z5Q1 589 aaKnown RBP15.38■□□□□ 0.05
CLCF1-201ENST00000312438 GGHQ92820 318 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 LPAR4Q99677 370 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 CXorf56Q9H5V9 222 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 EGLN3Q9H6Z9 239 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 SLC25A19Q9HC21 320 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 TVP23BQ9NYZ1 205 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 SELENONQ9NZV5 590 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 TMEM5Q9Y2B1 443 aa15.38■□□□□ 0.05
CLCF1-201ENST00000312438 NINQ8N4C6 2090 aa15.37■□□□□ 0.05
CLCF1-201ENST00000312438 SEC16AO15027 2179 aa15.37■□□□□ 0.05
CLCF1-201ENST00000312438 GTPBP1O00178 669 aaKnown RBP15.37■□□□□ 0.05
CLCF1-201ENST00000312438 PIP5K1CO60331 668 aa15.37■□□□□ 0.05
CLCF1-201ENST00000312438 ITIH1P19827 911 aa15.37■□□□□ 0.05
CLCF1-201ENST00000312438 RBM34P42696 430 aaKnown RBP15.37■□□□□ 0.05
CLCF1-201ENST00000312438 GPR4P46093 362 aa15.37■□□□□ 0.05
CLCF1-201ENST00000312438 PLCXD2Q0VAA5 305 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms