RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 CGAP01215 116 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 CD8BP10966 210 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 UGT2B10P36537 528 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 CTBP2P56545 445 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 ABCE1P61221 599 aaKnown RBP17.51■□□□□ 0.39
LIME1-201ENST00000309546 RAC1P63000 192 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 EMX2Q04743 252 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 FOXF1Q12946 379 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 CTU2Q2VPK5 515 aaKnown RBP17.51■□□□□ 0.39
LIME1-201ENST00000309546 FAM214BQ7L5A3 538 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 ZNF550Q7Z398 422 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 RIMKLAQ8IXN7 391 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 OR5D16Q8NGK9 328 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 OR2V1Q8NHB1 315 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 MOAP1Q96BY2 351 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 ZC3HAV1LQ96H79 300 aaKnown RBP17.51■□□□□ 0.39
LIME1-201ENST00000309546 PAQR5Q9NXK6 330 aaPredicted RBP17.51■□□□□ 0.39
LIME1-201ENST00000309546 ELOVL5Q9NYP7 299 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 ZNF226Q9NYT6 803 aa17.51■□□□□ 0.39
LIME1-201ENST00000309546 ITPR3Q14573 2671 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 C16orf97H3BN30 126 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 H3BNH8 94 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 OIP5O43482 229 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 KLK2P20151 261 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 PSMA4P25789 261 aaKnown RBP17.5■□□□□ 0.39
LIME1-201ENST00000309546 SFTPDP35247 375 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 CLDN8P56748 225 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 RPS26P62854 115 aaKnown RBP17.5■□□□□ 0.39
LIME1-201ENST00000309546 HBA1P69905 142 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 GUSBP1Q15486 140 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 DEFB113Q30KQ7 82 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 NDUFAF6Q330K2 333 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.5■□□□□ 0.39
LIME1-201ENST00000309546 PDSS1Q5T2R2 415 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 HBMQ6B0K9 141 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 OR4F3Q6IEY1 312 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 MTERF4Q7Z6M4 381 aaKnown RBP17.5■□□□□ 0.39
LIME1-201ENST00000309546 CLECL1Q8IZS7 167 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 CLEC4FQ8N1N0 589 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 MBD6Q96DN6 1003 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 ADGRG7Q96K78 797 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 OR7D2Q96RA2 312 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 TMUB1Q9BVT8 246 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 KLHL4Q9C0H6 718 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 HOXD1Q9GZZ0 328 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 CARD8Q9Y2G2 431 aa17.5■□□□□ 0.39
LIME1-201ENST00000309546 A0A0J9YW62 118 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 TM9SF1O15321 606 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 BIRC5O15392 142 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 LINGO3P0C6S8 592 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 MYZAPP0CAP1 466 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 IL11P20809 199 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 CEP85LQ5SZL2 805 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 ANKRD34AQ69YU3 496 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 BHLHB9Q6PI77 547 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 CBLN3Q6UW01 205 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 ESPNLQ6ZVH7 1005 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 LILRA2Q8N149 483 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 TMCO5AQ8N6Q1 288 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 RFWD2Q8NHY2 731 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 PIK3IP1Q96FE7 263 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 GMPPAQ96IJ6 420 aaPredicted RBP17.49■□□□□ 0.39
LIME1-201ENST00000309546 KLHL15Q96M94 604 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 AKTIPQ9H8T0 292 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 KCNK9Q9NPC2 374 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 ASIC5Q9NY37 505 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 RAP2CQ9Y3L5 183 aa17.49■□□□□ 0.39
LIME1-201ENST00000309546 RNF103-CHMP3A0A140T963 221 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 GTPBP1O00178 669 aaKnown RBP17.48■□□□□ 0.39
LIME1-201ENST00000309546 ADAMDEC1O15204 470 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 SS18L1O75177 396 aaPredicted RBP17.48■□□□□ 0.39
LIME1-201ENST00000309546 BGNP21810 368 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 SHC1P29353 583 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 EIF1P41567 113 aaKnown RBP17.48■□□□□ 0.39
LIME1-201ENST00000309546 SLC1A6P48664 564 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 P2RX1P51575 399 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 CCR4P51679 360 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 ATP12AP54707 1039 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 C21orf58P58505 322 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 FOXD4Q12950 439 aaPredicted RBP17.48■□□□□ 0.39
LIME1-201ENST00000309546 KLHL26Q53HC5 615 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 ATP6V1C2Q8NEY4 427 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 OR4A15Q8NGL6 344 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 OR6K3Q8NGY3 331 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 FBXO27Q8NI29 283 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 SLC35G5Q96KT7 338 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 ZIM3Q96PE6 472 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 C20orf27Q9GZN8 174 aa17.48■□□□□ 0.39
LIME1-201ENST00000309546 SSU72Q9NP77 194 aaKnown RBP17.48■□□□□ 0.39
LIME1-201ENST00000309546 SIAH2O43255 324 aa17.47■□□□□ 0.39
LIME1-201ENST00000309546 SOX30O94993 753 aa17.47■□□□□ 0.39
LIME1-201ENST00000309546 MATN1P21941 496 aa17.47■□□□□ 0.39
LIME1-201ENST00000309546 CRYGSP22914 178 aa17.47■□□□□ 0.39
LIME1-201ENST00000309546 PCYT1AP49585 367 aa17.47■□□□□ 0.39
LIME1-201ENST00000309546 RPL14P50914 215 aaKnown RBP17.47■□□□□ 0.39
LIME1-201ENST00000309546 CASP9P55211 416 aa17.47■□□□□ 0.39
LIME1-201ENST00000309546 SMU1Q2TAY7 513 aa17.47■□□□□ 0.39
LIME1-201ENST00000309546 C6orf120Q7Z4R8 191 aa17.47■□□□□ 0.39
LIME1-201ENST00000309546 ANKRD46Q86W74 232 aa17.47■□□□□ 0.39
LIME1-201ENST00000309546 OSTF1Q92882 214 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms