RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TRIP6Q15654 476 aaKnown RBP10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 ANKDD1AQ495B1 522 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 AWAT2Q6E213 333 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 PAQR7Q86WK9 346 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 HS3ST5Q8IZT8 346 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF687Q8N1G0 1237 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 NETO1Q8TDF5 533 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 FOXN4Q96NZ1 517 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 OR10A2Q9H208 303 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 MTCH2Q9Y6C9 303 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 CCRL2O00421 344 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 CD1CP29017 333 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 CBLBQ13191 982 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 TMED4Q7Z7H5 227 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 NPRL2Q8WTW4 380 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 GAB3Q8WWW8 586 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC7A6OSQ96CW6 309 aaPredicted RBP10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 MED11Q9P086 117 aa10.02□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF850A8MQ14 1090 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC2A5P22732 501 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 CLDN17P56750 224 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 HOXC5Q00444 222 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 GLO1Q04760 184 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 FBXL20Q96IG2 436 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 URM1Q9BTM9 101 aaKnown RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 IER3IP1Q9Y5U9 82 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 CCDC187A0A096LP49 1063 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 PCGF2P35227 344 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 PCBD1P61457 104 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 PIN1Q13526 163 aaPredicted RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 CAMK2DQ13557 499 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 TRAM1Q15629 374 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 TNFAIP8L3Q5GJ75 292 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 YOD1Q5VVQ6 348 aaPredicted RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 PACRGLQ8N7B6 248 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 LRR1Q96L50 414 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC46A1Q96NT5 459 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 MAGIXQ9H6Y5 334 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF69Q9UC07 566 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 SAGE2PA6NJ88 616 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 JRKO75564 520 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ACTL6BO94805 426 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 SLCO2B1O94956 709 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 GPR85P60893 370 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF613Q6PF04 617 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 Q6ZNB5 142 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF534Q76KX8 674 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 MISPQ8IVT2 679 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 IQCF1Q8N6M8 205 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 GALNT11Q8NCW6 608 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 DGCR14Q96DF8 476 aaKnown RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ZPBPQ9BS86 351 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ARFGEF1Q9Y6D6 1849 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 PRKRAO75569 313 aaKnown RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF806P0C7X5 589 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 SLC2A2P11168 524 aaPredicted RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 PVALBP20472 110 aaPredicted RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 S100A10P60903 97 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 AGBL4Q5VU57 503 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 CEACAM19Q7Z692 300 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 CCDC120Q96HB5 630 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 TAAR9Q96RI9 348 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 DISC1C4P0D8 188 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 B4GAT1O43505 415 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 CNOT4O95628 575 aaKnown RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 CTSLP07711 333 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 RPS17P08708 135 aaKnown RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 MSL3P1P0C860 447 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 CELP19835 753 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 VAMP1P23763 118 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ERVK-25P63136 954 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ATP6AP1Q15904 470 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 FAM111BQ6SJ93 734 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 C3P1Q6ZMU1 363 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 CNTN4Q8IWV2 1026 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 PDLIM5Q96HC4 596 aaKnown RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 IER2Q9BTL4 223 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 NXF5Q9H1B4 397 aaKnown RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 FSCN3Q9NQT6 498 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ABCD2Q9UBJ2 740 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ZNF337Q9Y3M9 751 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 FOCADQ5VW36 1801 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 HEXAP06865 529 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 UQCRC1P31930 480 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 OPRD1P41143 372 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 FRKP42685 505 aaPredicted RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 CDH15P55291 814 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 TPTEP56180 551 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 PPIAP62937 165 aaKnown RBP10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 SIGLEC14Q08ET2 396 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 OR1Q1Q15612 314 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 PLCXD3Q63HM9 321 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 MED25Q71SY5 747 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 KLBQ86Z14 1044 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 NT5C3BQ969T7 300 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 ABRACLQ9P1F3 81 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 PCDHGA3Q9Y5H0 932 aa10.01□□□□□ -0.81
SYNPO2-201ENST00000307142 FGF4P08620 206 aa10□□□□□ -0.81
SYNPO2-201ENST00000307142 POU3F1Q03052 451 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms