RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 NDUFAF5Q5TEU4 345 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 ZNF619Q8N2I2 560 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 GATSQ8NAP1 163 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 DCBLD2Q96PD2 775 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 SLC6A16Q9GZN6 736 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 KIR3DX1Q9H7L2 352 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 LTB4R2Q9NPC1 389 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 ENAMQ9NRM1 1142 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 NBASA2RRP1 2371 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 SLC22A31A6NKX4 558 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 H3BSH0 61 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 GALR3O60755 368 aaPredicted RBP7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 ZNF14P17017 642 aaPredicted RBP7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 NUBP1P53384 320 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 DIO3P55073 304 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 GRB7Q14451 532 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 ASB11Q8WXH4 323 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 CNN2Q99439 309 aaKnown RBP7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 ACSS1Q9NUB1 689 aaPredicted RBP7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 MEGF11A6BM72 1044 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 SH2D7A6NKC9 451 aaPredicted RBP7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 C9JVG2 144 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 FAAHO00519 579 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 XPNPEP2O43895 674 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 EEDO75530 441 aaKnown RBP7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 CDRT1O95170 752 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 LCATP04180 440 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 SNU13P55769 128 aaKnown RBP7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 LGALS4P56470 323 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 ACTBP60709 375 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 ACTG1P63261 375 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 C1orf61Q13536 156 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 TSTQ16762 297 aaKnown RBP7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 ANKDD1AQ495B1 522 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 CCDC116Q8IYX3 515 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 SLC43A2Q8N370 569 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 DCSTAMPQ9H295 470 aa7.84□□□□□ -1.15
PCDHB1-201ENST00000306549 OR6C70A6NIJ9 312 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 A6NL46 340 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 LMO7DNF2Z398 122 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 EGFP01133 1207 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 OPN1SWP03999 348 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 F2RL1P55085 397 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 PCLAFQ15004 111 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 LRIT3Q3SXY7 679 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 CYBRD1Q53TN4 286 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 GSG1LQ6UXU4 331 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 RBMS3Q6XE24 437 aaKnown RBP7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF517Q6ZMY9 492 aaPredicted RBP7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 GALNT6Q8NCL4 622 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 OR4N2Q8NGD1 307 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 OR4K15Q8NH41 348 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF675Q8TD23 568 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 SLC19A3Q9BZV2 496 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 CUEDC1Q9NWM3 386 aaPredicted RBP7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 PAQR5Q9NXK6 330 aaPredicted RBP7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 MAB21L2Q9Y586 359 aa7.84□□□□□ -1.16
PCDHB1-201ENST00000306549 KLRC4-KLRK1H3BQV0 150 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ADAM12O43184 909 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SCRG1O75711 98 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 RPS2P15880 293 aaKnown RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 HAGHLQ6PII5 290 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 OR1J2Q8NGS2 313 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 AURKBQ96GD4 344 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 OR14A2Q96R54 314 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 RBM24Q9BX46 236 aaKnown RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 GCM1Q9NP62 436 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 TREX1Q9NSU2 369 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 NDUFAF4Q9P032 175 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 PCDHGA5Q9Y5G8 931 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SDK2Q58EX2 2172 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SNRNP200O75643 2136 aaKnown RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 H7C2Y5 167 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 RNASET2O00584 256 aaKnown RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SIX3O95343 332 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 POU3F2P20265 443 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 AK4P27144 223 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SLC10A2Q12908 348 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CNN3Q15417 329 aaKnown RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 TMEM205Q6UW68 189 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 RTN4RL1Q86UN2 441 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 OR7G3Q8NG95 312 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 OR8K3Q8NH51 312 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 LOXL4Q96JB6 756 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF681Q96N22 645 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 OR10A5Q9H207 317 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 OR10A2Q9H208 303 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 SH3BGRL2Q9UJC5 107 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 PRELID3BQ9Y3B1 194 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 FER1L5A0AVI2 2057 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF860A6NHJ4 632 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 WDPCPO95876 746 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CREB1P16220 341 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 TCN2P20062 427 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 CRABP1P29762 137 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 GPX6P59796 221 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 EEF1A2Q05639 463 aaKnown RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 METRNLQ641Q3 311 aa7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ZNF431Q8TF32 576 aaPredicted RBP7.83□□□□□ -1.16
PCDHB1-201ENST00000306549 ESAMQ96AP7 390 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms