RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 OBSL1O75147 1896 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 KLHL18O94889 574 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 ADRB1P08588 477 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 MRPL19P49406 292 aaKnown RBP10.2□□□□□ -0.78
LSM3-201ENST00000306024 POLR2GP62487 172 aaKnown RBP eCLIP10.2□□□□□ -0.78
LSM3-201ENST00000306024 MTAPQ13126 283 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 VEZF1Q14119 521 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 MLIPQ5VWP3 458 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 PYHIN1Q6K0P9 492 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 NOXRED1Q6NXP6 359 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 SLC36A4Q6YBV0 504 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 THOC6Q86W42 341 aaKnown RBP10.2□□□□□ -0.78
LSM3-201ENST00000306024 NAGSQ8N159 534 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 C12orf45Q8N5I9 185 aaPredicted RBP10.2□□□□□ -0.78
LSM3-201ENST00000306024 OR11H7Q8NGC8 314 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 OR5AR1Q8NGP9 310 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 OR5AK3PQ8NH89 298 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 ASB11Q8WXH4 323 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 OR10A4Q9H209 315 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 CTPS2Q9NRF8 586 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 PLEKHB1Q9UF11 243 aaPredicted RBP10.2□□□□□ -0.78
LSM3-201ENST00000306024 SLC6A14Q9UN76 642 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 PCDHB11Q9Y5F2 797 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 CHD9Q3L8U1 2897 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 IRGMA1A4Y4 181 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 OR6C74A6NCV1 312 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 ANKDD1BA6NHY2 528 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 SLC16A5O15375 505 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 SDC3O75056 442 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 ETFAP13804 333 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 SDC1P18827 310 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 PITPNBP48739 271 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 MEOX2P50222 304 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 COL19A1Q14993 1142 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 PCBP2Q15366 365 aaKnown RBP eCLIP10.2□□□□□ -0.78
LSM3-201ENST00000306024 PLK5Q496M5 336 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 PAN3Q58A45 887 aaKnown RBP10.2□□□□□ -0.78
LSM3-201ENST00000306024 TMEM88Q6PEY1 159 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 RAB11FIP2Q7L804 512 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 CXXC5Q7LFL8 322 aaKnown RBP10.2□□□□□ -0.78
LSM3-201ENST00000306024 KRT78Q8N1N4 520 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 OR13H1Q8NG92 308 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 FCRL4Q96PJ5 515 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 IFT27Q9BW83 186 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 SRMSQ9H3Y6 488 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 B3GAT2Q9NPZ5 323 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 PRMT8Q9NR22 394 aaPredicted RBP10.2□□□□□ -0.78
LSM3-201ENST00000306024 FAM120CQ9NX05 1096 aaKnown RBP10.2□□□□□ -0.78
LSM3-201ENST00000306024 HEBP2Q9Y5Z4 205 aa10.2□□□□□ -0.78
LSM3-201ENST00000306024 KNTC1P50748 2209 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 TTLL8A6PVC2 850 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 MT-ND4P03905 459 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 ANXA4P09525 319 aaPredicted RBP10.19□□□□□ -0.78
LSM3-201ENST00000306024 CD9P21926 228 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 RORAP35398 523 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 CDK6Q00534 326 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 ENPP2Q13822 863 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 GINS1Q14691 196 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 SBSNQ6UWP8 590 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 LINGO2Q7L985 606 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 LRRC70Q7Z2Q7 622 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 OR4E2Q8NGC2 313 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 TNFAIP8L1Q8WVP5 186 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 PDXPQ96GD0 296 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 ZC3H10Q96K80 434 aaKnown RBP10.19□□□□□ -0.78
LSM3-201ENST00000306024 FCRL1Q96LA6 429 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 SLC6A18Q96N87 628 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 EPHX3Q9H6B9 360 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 IL20Q9NYY1 176 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 MBD1Q9UIS9 605 aaPredicted RBP10.19□□□□□ -0.78
LSM3-201ENST00000306024 MED16Q9Y2X0 877 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 PLEKHM1Q9Y4G2 1056 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 IGLV3-16A0A075B6K0 115 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 GPR89AB7ZAQ6 455 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 GPR171O14626 319 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 GPR89BP0CG08 455 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 EPORP19235 508 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 CD38P28907 300 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 CRB2Q5IJ48 1285 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 LRIF1Q5T3J3 769 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 NANOGP1Q8N7R0 232 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 OR52H1Q8NGJ2 320 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 OR1E3Q8WZA6 343 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 TBC1D20Q96BZ9 403 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 APIPQ96GX9 242 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 ZC3HAV1LQ96H79 300 aaKnown RBP10.19□□□□□ -0.78
LSM3-201ENST00000306024 AHCYL2Q96HN2 611 aaKnown RBP10.19□□□□□ -0.78
LSM3-201ENST00000306024 SIGLEC11Q96RL6 698 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 ACPTQ9BZG2 426 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 WSB2Q9NYS7 404 aaPredicted RBP10.19□□□□□ -0.78
LSM3-201ENST00000306024 TAC3Q9UHF0 121 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 C17orf113A0A1B0GUU1 675 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 ATG12O94817 140 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 GASTP01350 101 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 HBQ1P09105 142 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 HOXA1P49639 335 aaPredicted RBP10.19□□□□□ -0.78
LSM3-201ENST00000306024 PDSS1Q5T2R2 415 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 PRAMEF13Q5VWM6 474 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 ZNF600Q6ZNG1 722 aa10.19□□□□□ -0.78
LSM3-201ENST00000306024 SLC30A8Q8IWU4 369 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms