RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 NME5P56597 212 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 UFM1P61960 85 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 ZNF117Q03924 483 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 LRRC74AQ0VAA2 488 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 PON3Q15166 354 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 ARHGAP11BQ3KRB8 267 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 C16orf62Q7Z3J2 963 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 LUZP2Q86TE4 346 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 GGNQ86UU5 652 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 FIG4Q92562 907 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 RNF145Q96MT1 663 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 NMUR2Q9GZQ4 415 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 OR51I1Q9H343 314 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 TUBAL3A6NHL2 446 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 GTPBP1O00178 669 aaKnown RBP23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 EIF1AYO14602 144 aaKnown RBP23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 STX11O75558 287 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 NUDT14O95848 222 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 CHI3L1P36222 383 aaPredicted RBP23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 P2RX1P51575 399 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 RAC1P63000 192 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 FGFBP1Q14512 234 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 ATAD3BQ5T9A4 648 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 NXNQ6DKJ4 435 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 CDH24Q86UP0 819 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 ZNF614Q8N883 585 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 PIWIL2Q8TC59 973 aaKnown RBP23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 MAELQ96JY0 434 aaKnown RBP23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 TEX37Q96LM6 180 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 CCDC115Q96NT0 180 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 RNF122Q9H9V4 155 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 CARD8Q9Y2G2 431 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 GPR45Q9Y5Y3 372 aa23.79■■□□□ 1.4
CDKN2A-201ENST00000304494 LINGO3P0C6S8 592 aa23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 IDO1P14902 403 aa23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 PSMA4P25789 261 aaKnown RBP23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 EIF1AXP47813 144 aaKnown RBP23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 SAXO2Q658L1 398 aa23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 TRIML2Q8N7C3 387 aa23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 CNEP1R1Q8N9A8 125 aa23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 GLB1L3Q8NCI6 653 aaPredicted RBP23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 FNDC9Q8TBE3 224 aa23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 NEURL3Q96EH8 262 aa23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 ZNF845Q96IR2 970 aaPredicted RBP23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 SLC35A5Q9BS91 424 aa23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 GALNT8Q9NY28 637 aa23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 ICAM5Q9UMF0 924 aa23.78■■□□□ 1.4
CDKN2A-201ENST00000304494 MSTNO14793 375 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 EIF4E2O60573 245 aaKnown RBP23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 CTAG2O75638 210 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 PGRP06401 933 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 ELK4P28324 431 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 KHKP50053 298 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 GPR68Q15743 365 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 HEPHL1Q6MZM0 1159 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 CBLN3Q6UW01 205 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 ZNF75CPQ92670 426 aaPredicted RBP23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 ARL8AQ96BM9 186 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 OR52E6Q96RD3 313 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 PANX1Q96RD7 426 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 ZNF350Q9GZX5 532 aa23.77■■□□□ 1.4
CDKN2A-201ENST00000304494 PCNX3Q9H6A9 2034 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 A8MXE2 369 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 ZNF264O43296 627 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 GUSBP08236 651 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 UBL4AP11441 157 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 ADH6P28332 368 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 CASP9P55211 416 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 ZNF141Q15928 474 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 PDSS1Q5T2R2 415 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 PDZK1Q5T2W1 519 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 ESPNLQ6ZVH7 1005 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 TOR1AIP2Q8NFQ8 470 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 POC1BQ8TC44 478 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 XAGE5Q8WWM1 108 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 OIT3Q8WWZ8 545 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 STARD4Q96DR4 205 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 NPAS1Q99742 590 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 PRRG4Q9BZD6 226 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 POLE3Q9NRF9 147 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 MCTS1Q9ULC4 181 aaKnown RBP23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 GPC6Q9Y625 555 aaPredicted RBP23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 OTOGQ6ZRI0 2925 aa23.76■■□□□ 1.39
CDKN2A-201ENST00000304494 SERINC4A6NH21 518 aa23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 ADAMDEC1O15204 470 aa23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 FCMRO60667 390 aa23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 SMNDC1O75940 238 aaKnown RBP eCLIP23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 IL6P05231 212 aa23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 OR12D1P0DN82 309 aa23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 EPXP11678 715 aa23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 IL12AP29459 219 aa23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 RNF144AP50876 292 aaPredicted RBP23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 FOXF1Q12946 379 aa23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 GSTA3Q16772 222 aa23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 PDCD4Q53EL6 469 aaKnown RBP23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 TNFAIP8L2Q6P589 184 aaPredicted RBP23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 LILRA2Q8N149 483 aa23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 TMCO5AQ8N6Q1 288 aa23.75■■□□□ 1.39
CDKN2A-201ENST00000304494 OR10D3Q8NH80 312 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms