RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 B4DXG7 233 aa22.28■■□□□ 1.16
HOXC9-201ENST00000303450 EIF4E2O60573 245 aaKnown RBP22.28■■□□□ 1.16
HOXC9-201ENST00000303450 CYP7B1O75881 506 aa22.28■■□□□ 1.16
HOXC9-201ENST00000303450 THBS1P07996 1170 aa22.28■■□□□ 1.16
HOXC9-201ENST00000303450 PABPC4LP0CB38 370 aaKnown RBP22.28■■□□□ 1.16
HOXC9-201ENST00000303450 UBTFL6P0CB48 400 aaPredicted RBP22.28■■□□□ 1.16
HOXC9-201ENST00000303450 SLC10A1Q14973 349 aa22.28■■□□□ 1.16
HOXC9-201ENST00000303450 NDUFAF6Q330K2 333 aa22.28■■□□□ 1.16
HOXC9-201ENST00000303450 BNC2Q6ZN30 1099 aaPredicted RBP22.28■■□□□ 1.16
HOXC9-201ENST00000303450 PATL1Q86TB9 770 aaKnown RBP22.28■■□□□ 1.16
HOXC9-201ENST00000303450 SIAH3Q8IW03 269 aa22.28■■□□□ 1.16
HOXC9-201ENST00000303450 TMCO5AQ8N6Q1 288 aa22.28■■□□□ 1.16
HOXC9-201ENST00000303450 BARD1Q99728 777 aaKnown RBP22.28■■□□□ 1.16
HOXC9-201ENST00000303450 C1orf21Q9H246 121 aa22.28■■□□□ 1.16
HOXC9-201ENST00000303450 SEC14L3Q9UDX4 400 aa22.28■■□□□ 1.16
HOXC9-201ENST00000303450 DKKL1Q9UK85 242 aa22.28■■□□□ 1.16
HOXC9-201ENST00000303450 FREM3P0C091 2139 aa22.27■■□□□ 1.16
HOXC9-201ENST00000303450 CMPK2Q5EBM0 449 aa22.27■■□□□ 1.16
HOXC9-201ENST00000303450 SAMD4BQ5PRF9 694 aaKnown RBP22.27■■□□□ 1.16
HOXC9-201ENST00000303450 MRPL2Q5T653 305 aaKnown RBP22.27■■□□□ 1.16
HOXC9-201ENST00000303450 CBLN3Q6UW01 205 aa22.27■■□□□ 1.16
HOXC9-201ENST00000303450 ZNF836Q6ZNA1 936 aa22.27■■□□□ 1.16
HOXC9-201ENST00000303450 RNF148Q8N7C7 305 aa22.27■■□□□ 1.16
HOXC9-201ENST00000303450 TNIP2Q8NFZ5 429 aa22.27■■□□□ 1.16
HOXC9-201ENST00000303450 ARMC7Q9H6L4 198 aa22.27■■□□□ 1.16
HOXC9-201ENST00000303450 TAS2R1Q9NYW7 299 aa22.27■■□□□ 1.16
HOXC9-201ENST00000303450 PACSIN3Q9UKS6 424 aa22.27■■□□□ 1.16
HOXC9-201ENST00000303450 PCNX3Q9H6A9 2034 aa22.27■■□□□ 1.16
HOXC9-201ENST00000303450 CFAP46Q8IYW2 2715 aa22.27■■□□□ 1.16
HOXC9-201ENST00000303450 M0QX08 132 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 GSTA4O15217 222 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 OIP5O43482 229 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 CELA3AP09093 270 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 DPP4P27487 766 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 PGM1P36871 562 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 P2RX1P51575 399 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 CCR4P51679 360 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 DSCR4P56555 118 aaPredicted RBP22.26■■□□□ 1.15
HOXC9-201ENST00000303450 BNIP1Q12981 228 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 ARMC8Q8IUR7 673 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 SLX1AQ9BQ83 275 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 LAT2Q9GZY6 243 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 PRORSD1PA6NEY8 169 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 CDC40O60508 579 aaKnown RBP eCLIP22.26■■□□□ 1.15
HOXC9-201ENST00000303450 GCM2O75603 506 aaPredicted RBP22.26■■□□□ 1.15
HOXC9-201ENST00000303450 NUDT14O95848 222 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 HPNP05981 417 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 SRD5A2P31213 254 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 EEF1A1P68104 462 aaKnown RBP22.26■■□□□ 1.15
HOXC9-201ENST00000303450 SKP2Q13309 424 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 GANABQ14697 944 aaKnown RBP22.26■■□□□ 1.15
HOXC9-201ENST00000303450 ZSWIM7Q19AV6 140 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 KRTCAP3Q53RY4 240 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 RNF220Q5VTB9 566 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 CCDC80Q76M96 950 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 TOR1AIP2Q8NFQ8 470 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 SLC26A7Q8TE54 656 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 GPR137Q96N19 417 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 LDAHQ9H6V9 325 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 RLIMQ9NVW2 624 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 ICAM5Q9UMF0 924 aa22.26■■□□□ 1.15
HOXC9-201ENST00000303450 WISP2O76076 250 aa22.25■■□□□ 1.15
HOXC9-201ENST00000303450 MFN2O95140 757 aa22.25■■□□□ 1.15
HOXC9-201ENST00000303450 PRKAR1BP31321 381 aa22.25■■□□□ 1.15
HOXC9-201ENST00000303450 TLE1Q04724 770 aa22.25■■□□□ 1.15
HOXC9-201ENST00000303450 C19orf57Q0VDD7 668 aa22.25■■□□□ 1.15
HOXC9-201ENST00000303450 YRDCQ86U90 279 aaKnown RBP22.25■■□□□ 1.15
HOXC9-201ENST00000303450 FAM71CQ8NEG0 241 aa22.25■■□□□ 1.15
HOXC9-201ENST00000303450 FAM83FQ8NEG4 500 aaPredicted RBP22.25■■□□□ 1.15
HOXC9-201ENST00000303450 OR14L1PQ8NHC6 308 aa22.25■■□□□ 1.15
HOXC9-201ENST00000303450 CNOT9Q92600 299 aaKnown RBP22.25■■□□□ 1.15
HOXC9-201ENST00000303450 C1GALT1C1Q96EU7 318 aa22.25■■□□□ 1.15
HOXC9-201ENST00000303450 ACKR4Q9NPB9 350 aa22.25■■□□□ 1.15
HOXC9-201ENST00000303450 DNAJB12Q9NXW2 375 aaKnown RBP22.25■■□□□ 1.15
HOXC9-201ENST00000303450 TAS2R10Q9NYW0 307 aa22.25■■□□□ 1.15
HOXC9-201ENST00000303450 ZNF407Q9C0G0 2248 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 CDHR4A6H8M9 788 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 GYG2O15488 501 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 BCAS1O75363 584 aaPredicted RBP22.24■■□□□ 1.15
HOXC9-201ENST00000303450 ATP5HO75947 161 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 OPN1SWP03999 348 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 TCN1P20061 433 aaPredicted RBP22.24■■□□□ 1.15
HOXC9-201ENST00000303450 ZNF41P51814 821 aaPredicted RBP22.24■■□□□ 1.15
HOXC9-201ENST00000303450 TDGF1P3P51864 188 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 SUMO3P55854 103 aaPredicted RBP22.24■■□□□ 1.15
HOXC9-201ENST00000303450 SPATS1Q496A3 300 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 CLIP4Q8N3C7 705 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 BHLHE22Q8NFJ8 381 aaPredicted RBP22.24■■□□□ 1.15
HOXC9-201ENST00000303450 OR5W2Q8NH69 310 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 FIG4Q92562 907 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 EXO5Q9H790 373 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 EXOSC3Q9NQT5 275 aaKnown RBP22.24■■□□□ 1.15
HOXC9-201ENST00000303450 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.24■■□□□ 1.15
HOXC9-201ENST00000303450 HEATR5AQ86XA9 2040 aa22.24■■□□□ 1.15
HOXC9-201ENST00000303450 SHANK1Q9Y566 2161 aa22.23■■□□□ 1.15
HOXC9-201ENST00000303450 ANKUB1A6NFN9 424 aa22.23■■□□□ 1.15
HOXC9-201ENST00000303450 FAM47E-STBD1D6RA91 191 aa22.23■■□□□ 1.15
HOXC9-201ENST00000303450 EBAG9O00559 213 aa22.23■■□□□ 1.15
HOXC9-201ENST00000303450 CXCR6O00574 342 aa22.23■■□□□ 1.15
HOXC9-201ENST00000303450 IFNA14P01570 189 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms