RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 SLC35F3Q8IY50 421 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 LFNGQ8NES3 379 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 UBTD2Q8WUN7 234 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 MSI2Q96DH6 328 aaKnown RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 SPHK2Q9NRA0 654 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 SLC22A11Q9NSA0 550 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 RBFOX1Q9NWB1 397 aaKnown RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 C1orf123Q9NWV4 160 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 MARCH4Q9P2E8 410 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 A0A1W2PPK0 400 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 GLTPD2A6NH11 291 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ATP6V1G2-DDX39BF2Z307 99 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 MITFO75030 526 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 SLC43A1O75387 559 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 KCNK5O95279 499 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 GABRB3P28472 473 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 GRPRP30550 384 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 DEFB134Q4QY38 66 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 LRFN4Q6PJG9 635 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 MEPCEQ7L2J0 689 aaKnown RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 KLHDC8AQ8IYD2 350 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 SAMD8Q96LT4 415 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 PTCHD1Q96NR3 888 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF281Q9Y2X9 895 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 V9GY05 133 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 CA12O43570 354 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 AP1G1O43747 822 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 PPP1R3DO95685 299 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 C5AR1P21730 350 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 GKP32189 559 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 NUDT1P36639 197 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 AQP2P41181 271 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 RAB30Q15771 203 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 CCNJQ5T5M9 372 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 WBP2NLQ6ICG8 309 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF585AQ6P3V2 769 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 SPRED1Q7Z699 444 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 OR9Q2Q8NGE9 314 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 OR4K13Q8NH42 304 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 PLEKHJ1Q9NW61 149 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 LSM5Q9Y4Y9 91 aaKnown RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 OR7A17O14581 309 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ELK1P19419 428 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 EIF2B1Q14232 305 aaKnown RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 NADSYN1Q6IA69 706 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 PSAPL1Q6NUJ1 521 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 CNTNAP3Q9BZ76 1288 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 KCNIP2Q9NS61 270 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 GPR52Q9Y2T5 361 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 UBL3O95164 117 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 STATHP02808 62 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 SERPINE2P07093 398 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 CCNOP22674 350 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 IL4RP24394 825 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 CASP3P42574 277 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 RABIFP47224 123 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 PLA2G7Q13093 441 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 TMEM244Q5VVB8 128 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 FAM217AQ8IXS0 508 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 NPWQ8N729 165 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 OR8J2Q8NGG1 315 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 MIB2Q96AX9 1013 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 PRR11Q96HE9 360 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF681Q96N22 645 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 DEFB126Q9BYW3 111 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ARHGAP39Q9C0H5 1083 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 C11orf49Q9H6J7 331 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 SFXN1Q9H9B4 322 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 UGT2A1Q9Y4X1 527 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ENTPD2Q9Y5L3 495 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 CAPNS1P04632 268 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 POLR2CP19387 275 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 TAS2R30P59541 319 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 PCBD1P61457 104 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 HENMT1Q5T8I9 393 aaKnown RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 OR13F1Q8NGS4 319 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 FIBINQ8TAL6 211 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 CD99L2Q8TCZ2 262 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 OR52A5Q9H2C5 316 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 LRIT2A6NDA9 550 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 WASH4PA8MWX3 477 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 H3BSH0 61 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 OR2T1O43869 369 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF623O75123 536 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 OPRD1P41143 372 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 MCCD1P59942 119 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 DCST2Q5T1A1 773 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 RANBP10Q6VN20 620 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 HIST2H3AQ71DI3 136 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 WDTC1Q8N5D0 677 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 C3orf58Q8NDZ4 430 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 GIMAP1Q8WWP7 306 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 RSC1A1Q92681 617 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 ARPC5LQ9BPX5 153 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 GPR34Q9UPC5 381 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 LRP5LA4QPB2 252 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 LILRB3O75022 631 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 RPL35P42766 123 aaKnown RBP7.2□□□□□ -1.26
SF3B3-201ENST00000302516 GRM7Q14831 915 aa7.2□□□□□ -1.26
SF3B3-201ENST00000302516 RPS26P11Q5JNZ5 115 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms