RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ERV3-1Q14264 604 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 LINC00299Q6ZSB3 139 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 OR6F1Q8NGZ6 308 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 FGF13Q92913 245 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 C4orf36Q96KX1 117 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 PDCD10Q9BUL8 212 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 OR10A4Q9H209 315 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 HCN3Q9P1Z3 774 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 MGAT4AQ9UM21 535 aa13.14□□□□□ -0.31
SDC2-201ENST00000302190 ARPC4-TTLL3A0A0A6YYG9 625 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 A0A0G2JMP0 313 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 A0A0X1KG70 313 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 ANKRD61A6NGH8 418 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 AKR7A2O43488 359 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 DRD2P14416 443 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 GIFP27352 417 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 PDX1P52945 283 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 CSNK1G2P78368 415 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 FABP5Q01469 135 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 OC90Q02509 493 aaPredicted RBP13.13□□□□□ -0.31
SDC2-201ENST00000302190 CCDC157Q569K6 752 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 ABI3BPQ7Z7G0 1075 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 ASPGQ86U10 573 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 OR4M2Q8NGB6 313 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 TMEM163Q8TC26 289 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 CHFRQ96EP1 664 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 CDCP1Q9H5V8 836 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 SEMA4GQ9NTN9 838 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 A0A0B4J203 849 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 C11orf98E9PRG8 122 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 FLRT2O43155 660 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 PSPHP78330 225 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 ZNF33BQ06732 778 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 ATXN7L3Q14CW9 347 aaPredicted RBP13.13□□□□□ -0.31
SDC2-201ENST00000302190 MPEG1Q2M385 716 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 WFDC6Q9BQY6 131 aa13.13□□□□□ -0.31
SDC2-201ENST00000302190 A0A1W2PR48 441 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 HYKKA2RU49 373 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 MEIS3P1A6NDR6 274 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 ANXA2P2A6NMY6 339 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 FFAR1O14842 300 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 ANXA2P07355 339 aaKnown RBP13.12□□□□□ -0.31
SDC2-201ENST00000302190 ACP2P11117 423 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 SNRPBP14678 240 aaKnown RBP13.12□□□□□ -0.31
SDC2-201ENST00000302190 CTRB1P17538 263 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 CDKN3Q16667 212 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 CTRB2Q6GPI1 263 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 TECPR1Q7Z6L1 1165 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 TMED4Q7Z7H5 227 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 OR5K2Q8NHB8 316 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 MSLNLQ96KJ4 702 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 THAP7Q9BT49 309 aaPredicted RBP13.12□□□□□ -0.31
SDC2-201ENST00000302190 SLC17A9Q9BYT1 436 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 FXYD6-FXYD2A0A087WZ82 144 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 A0A0G2JPF8 293 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 UBE2QL1A1L167 161 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 HNRNPCL3B7ZW38 293 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 EFCAB14O75071 495 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 GATBO75879 557 aaKnown RBP13.12□□□□□ -0.31
SDC2-201ENST00000302190 HNRNPCL4P0DMR1 293 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 F8A1P23610 371 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 BCL6P41182 706 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 IRF4Q15306 451 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 GDPGP1Q6ZNW5 385 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 RASSF6Q6ZTQ3 369 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 LINC00471Q8N535 108 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 NANOGP1Q8N7R0 232 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 PHOSPHO1Q8TCT1 267 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 MRPL48Q96GC5 212 aaKnown RBP13.12□□□□□ -0.31
SDC2-201ENST00000302190 KATNB1Q9BVA0 655 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 FXYD6Q9H0Q3 95 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 TTYH1Q9H313 450 aaPredicted RBP13.12□□□□□ -0.31
SDC2-201ENST00000302190 PLCXD1Q9NUJ7 323 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 RDH8Q9NYR8 311 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 TEX13CA0A0J9YWL9 993 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 H0Y8X5 98 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 MT-ND4P03905 459 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 CD79BP40259 229 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 MNDAP41218 407 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 TSPAN5P62079 268 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 HTRA4P83105 476 aaPredicted RBP13.12□□□□□ -0.31
SDC2-201ENST00000302190 RAB40BQ12829 278 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 SQSTM1Q13501 440 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 EIPR1Q53HC9 387 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 NLRP8Q86W28 1048 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 OR2T35Q8NGX2 323 aa13.12□□□□□ -0.31
SDC2-201ENST00000302190 ADAD1Q96M93 576 aaKnown RBP13.12□□□□□ -0.31
SDC2-201ENST00000302190 PNO1Q9NRX1 252 aaKnown RBP13.12□□□□□ -0.31
SDC2-201ENST00000302190 OR2W5A6NFC9 320 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 HMX3A6NHT5 357 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 NUPL2O15504 423 aaKnown RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 IL1AP01583 271 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 DNASE1P24855 282 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 GRK6P43250 576 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 MRPL19P49406 292 aaKnown RBP13.11□□□□□ -0.31
SDC2-201ENST00000302190 AKR1D1P51857 326 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 C19orf57Q0VDD7 668 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 LRRC37A5PQ49AS3 106 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 ALG10BQ5I7T1 473 aa13.11□□□□□ -0.31
SDC2-201ENST00000302190 OR4D11Q8NGI4 311 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms