RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ZNF10P21506 573 aaPredicted RBP20.36■□□□□ 0.85
TPM4-201ENST00000300933 GABRA3P34903 492 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 GDF7Q7Z4P5 450 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 PARGQ86W56 976 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 SAP130Q9H0E3 1048 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 KLHL28Q9NXS3 571 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 ZNF780AO75290 641 aaPredicted RBP20.36■□□□□ 0.85
TPM4-201ENST00000300933 CSF3P09919 207 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 GNSP15586 552 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 CCR5P51681 352 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 SNRPGP62308 76 aaKnown RBP20.36■□□□□ 0.85
TPM4-201ENST00000300933 NNATQ16517 81 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 SYT14P1Q58G82 188 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 PDZK1Q5T2W1 519 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 FHL5Q5TD97 284 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 RNF44Q7L0R7 432 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 COX18Q8N8Q8 333 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 LMX1AQ8TE12 382 aa20.36■□□□□ 0.85
TPM4-201ENST00000300933 MTHFD2LQ9H903 347 aaPredicted RBP20.36■□□□□ 0.85
TPM4-201ENST00000300933 SMLR1H3BR10 107 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 KIR2DL3P43628 341 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 OR3A3P47888 321 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 TRAM2Q15035 370 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 PEX5LQ8IYB4 626 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 VWA5B2Q8N398 1253 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 OR4N2Q8NGD1 307 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 TMEM203Q969S6 136 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 ANKRD9Q96BM1 317 aaPredicted RBP20.35■□□□□ 0.85
TPM4-201ENST00000300933 SLC41A3Q96GZ6 507 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 PEX11GQ96HA9 241 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 DIRAS2Q96HU8 199 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 RNF121Q9H920 327 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 MAT2BQ9NZL9 334 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 C19orf53Q9UNZ5 99 aaPredicted RBP20.35■□□□□ 0.85
TPM4-201ENST00000300933 IGHV1OR15-9A0A0B4J2B8 117 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 LOC105371267A0A1B0GV96 52 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 FABP12A6NFH5 140 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 CHST10O43529 356 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 CDRT1O95170 752 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 CLEC2LP0C7M8 214 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 FAPQ12884 760 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 PRICKLE4Q2TBC4 344 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 DCST2Q5T1A1 773 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 COQ7Q99807 217 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 CALML5Q9NZT1 146 aa20.35■□□□□ 0.85
TPM4-201ENST00000300933 WDFY3Q8IZQ1 3526 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 A0A1W2PQ72 361 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 PSMA1P25786 263 aaKnown RBP20.34■□□□□ 0.85
TPM4-201ENST00000300933 ST3GAL3Q11203 375 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 ARHGAP11BQ3KRB8 267 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 PYDC2Q56P42 97 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 B3GLCTQ6Y288 498 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 SYT13Q7L8C5 426 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 OTULINQ96BN8 352 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 LYRM4Q9HD34 91 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 STMN3Q9NZ72 180 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 UNC13CQ8NB66 2214 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 A0A1W2PQL4 384 aaPredicted RBP20.34■□□□□ 0.85
TPM4-201ENST00000300933 C10orf142B7Z368 130 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 CDC42EP2O14613 210 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 SLC2A10O95528 541 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 SCG5P05408 212 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 TRAPPC2P0DI81 140 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 TRAPPC2BP0DI82 140 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 PRKAR1BP31321 381 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 OMPP47874 163 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 COL19A1Q14993 1142 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 LIPKQ5VXJ0 399 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 MCATQ8IVS2 390 aaKnown RBP20.34■□□□□ 0.85
TPM4-201ENST00000300933 ENKURQ8TC29 256 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 DEDD2Q8WXF8 326 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 ZNF582Q96NG8 517 aaPredicted RBP20.34■□□□□ 0.85
TPM4-201ENST00000300933 CNOT2Q9NZN8 540 aaKnown RBP20.34■□□□□ 0.85
TPM4-201ENST00000300933 PTGFRNQ9P2B2 879 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 SPACA6W5XKT8 324 aa20.34■□□□□ 0.85
TPM4-201ENST00000300933 TGFBR3LH3BV60 316 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 SYT5O00445 386 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 CSO75390 466 aaKnown RBP20.33■□□□□ 0.85
TPM4-201ENST00000300933 UBXN7O94888 489 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 TSPAN19P0C672 248 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 CRYBB2P43320 205 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 BTG2P78543 158 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 CDK5Q00535 292 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 MGAT2Q10469 447 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 COX10Q12887 443 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 DEFB133Q30KQ1 61 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 MRPL2Q5T653 305 aaKnown RBP20.33■□□□□ 0.85
TPM4-201ENST00000300933 NKAIN2Q5VXU1 208 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 ZNF655Q8N720 491 aaPredicted RBP20.33■□□□□ 0.85
TPM4-201ENST00000300933 OR52R1Q8NGF1 315 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 TMEM80Q96HE8 168 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 MAP6Q96JE9 813 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 NTMQ9P121 344 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 TEKT2Q9UIF3 430 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 POMT2Q9UKY4 750 aa20.33■□□□□ 0.85
TPM4-201ENST00000300933 PLD2O14939 933 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 OR10H2O60403 315 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 HBQ1P09105 142 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 SRFP11831 508 aa20.33■□□□□ 0.84
TPM4-201ENST00000300933 GFERP55789 205 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms