RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 MIA3Q5JRA6 1907 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 THSD7AQ9UPZ6 1657 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 A0A0G2JPF8 293 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 HNRNPCL3B7ZW38 293 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 RNGTTO60942 597 aaKnown RBP12.44□□□□□ -0.42
CASC4-201ENST00000299957 IFNA7P01567 189 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 HNRNPCL4P0DMR1 293 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 PTHLHP12272 177 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 DRD2P14416 443 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 UGT2B10P36537 528 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 RAB40BQ12829 278 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 TCTN1Q2MV58 587 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 SLX4IPQ5VYV7 408 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 LYPD4Q6UWN0 246 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 SHISA6Q6ZSJ9 500 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 CAMKVQ8NCB2 501 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 ZNF248Q8NDW4 579 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 OR4M1Q8NGD0 313 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 OR5T3Q8NGG3 340 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 PFN4Q8NHR9 129 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 GHSRQ92847 366 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 FGF13Q92913 245 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 TNFRSF13CQ96RJ3 184 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 ISG20L2Q9H9L3 353 aaKnown RBP12.44□□□□□ -0.42
CASC4-201ENST00000299957 BABAM2Q9NXR7 383 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 NCOR1O75376 2440 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 UNC13CQ8NB66 2214 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 HYKKA2RU49 373 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 A8MVJ9 347 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 IL1AP01583 271 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 F13BP05160 661 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 TEAD1P28347 426 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 MAP3K8P41279 467 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 PTH2RP49190 550 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 SCRN3Q0VDG4 424 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 PLK5Q496M5 336 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 TRMT12Q53H54 448 aaKnown RBP12.44□□□□□ -0.42
CASC4-201ENST00000299957 TMEM150AQ86TG1 271 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 UBQLNLQ8IYU4 475 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 ANKRD53Q8N9V6 530 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 POGLUT1Q8NBL1 392 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 RIT1Q92963 219 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 PDXPQ96GD0 296 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 SLC38A3Q99624 504 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 POLDIP3Q9BY77 421 aaKnown RBP12.44□□□□□ -0.42
CASC4-201ENST00000299957 ZMAT3Q9HA38 289 aaKnown RBP12.44□□□□□ -0.42
CASC4-201ENST00000299957 HINT3Q9NQE9 182 aaKnown RBP12.44□□□□□ -0.42
CASC4-201ENST00000299957 C14orf105Q9NVL8 296 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 ASIC5Q9NY37 505 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 LIPT1Q9Y234 373 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 A0A1W2PR48 441 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 PEX12O00623 359 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 HCRTR2O43614 444 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 SPARCP09486 303 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 INHBBP09529 407 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 SLC6A6P31641 620 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 ARHGDIBP52566 201 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 MESP2Q0VG99 397 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 BEX5Q5H9J7 111 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 SAXO2Q658L1 398 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 GDPGP1Q6ZNW5 385 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 SLITRK4Q8IW52 837 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 GPR32P1Q8NGA4 272 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 MOSPD2Q8NHP6 518 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 PMM1Q92871 262 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 S100A16Q96FQ6 103 aaKnown RBP12.44□□□□□ -0.42
CASC4-201ENST00000299957 HS6ST2Q96MM7 605 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 OR2M4Q96R27 311 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 METTL17Q9H7H0 456 aaPredicted RBP12.44□□□□□ -0.42
CASC4-201ENST00000299957 SEC61A2Q9H9S3 476 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 FKBP14Q9NWM8 211 aa12.44□□□□□ -0.42
CASC4-201ENST00000299957 A0A0A6YYC8 382 aaPredicted RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 TRAPPC13A5PLN9 417 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 CNOT1A5YKK6 2376 aaKnown RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 B4DXG7 233 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 I3L1I5 382 aaPredicted RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 PRICKLE3O43900 615 aaPredicted RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 TRIM3O75382 744 aaPredicted RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 CRYZL1O95825 349 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 GTF2F2P13984 249 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 CST5P28325 142 aaPredicted RBP12.43□□□□□ -0.42
CASC4-201ENST00000299957 BCL6P41182 706 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 FXYD6P3P58550 94 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 CSNK1G2P78368 415 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 IRF4Q15306 451 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 NKPD1Q17RQ9 610 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 LRFN4Q6PJG9 635 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 LCTLQ6UWM7 567 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 NANOGP1Q8N7R0 232 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 TMEM99Q8N816 258 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 ZNF566Q969W8 418 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 LRIG1Q96JA1 1093 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 GABARAPL3Q9BY60 117 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 COMMD4Q9H0A8 199 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 CHST8Q9H2A9 424 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 OR51J1Q9H342 316 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 LAMP5Q9UJQ1 280 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 TMEM5Q9Y2B1 443 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 NAALAD2Q9Y3Q0 740 aa12.43□□□□□ -0.42
CASC4-201ENST00000299957 LY75O60449 1722 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms