RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 FAAHO00519 579 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 B3GALT2O43825 422 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 TOXO94900 526 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 ZIC2O95409 532 aaPredicted RBP9.41□□□□□ -0.9
FOXN4-201ENST00000299162 ADAP00813 363 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 GABRG2P18507 467 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 PGDP52209 483 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 FAPQ12884 760 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 PLAG1Q6DJT9 500 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 CORO6Q6QEF8 472 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 PRSS58Q8IYP2 241 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 LRRC25Q8N386 305 aaPredicted RBP9.41□□□□□ -0.9
FOXN4-201ENST00000299162 MFSD9Q8NBP5 474 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 TEX47Q8TBZ9 253 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 C1GALT1C1Q96EU7 318 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 SLC22A4Q9H015 551 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 MED20Q9H944 212 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 LIN7BQ9HAP6 207 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 SLC23A1Q9UHI7 598 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 MRPS7Q9Y2R9 242 aaKnown RBP9.41□□□□□ -0.9
FOXN4-201ENST00000299162 SPIN1Q9Y657 262 aaPredicted RBP9.41□□□□□ -0.9
FOXN4-201ENST00000299162 HMX3A6NHT5 357 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 A8MVJ9 347 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 LEUTXA8MZ59 168 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 PLD2O14939 933 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 FGF17O60258 216 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 GABRB1P18505 474 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 CD79BP40259 229 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 TNFRSF4P43489 277 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 MAZP56270 477 aaKnown RBP9.41□□□□□ -0.9
FOXN4-201ENST00000299162 TBCEQ15813 527 aaPredicted RBP9.41□□□□□ -0.9
FOXN4-201ENST00000299162 KLHL12Q53G59 568 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 ENTPD8Q5MY95 495 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 AVL9Q8NBF6 648 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 SRFBP1Q8NEF9 429 aaKnown RBP9.41□□□□□ -0.9
FOXN4-201ENST00000299162 ASB15Q8WXK1 588 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 KLHL6Q8WZ60 621 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 RIT1Q92963 219 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 GALNT9Q9HCQ5 603 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 SLC7A7Q9UM01 511 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 MGAT4BQ9UQ53 548 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 A0A1W2PQL4 384 aaPredicted RBP9.41□□□□□ -0.9
FOXN4-201ENST00000299162 CCDC85CA6NKD9 419 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 C2CD4DB7Z1M9 353 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 OR10H2O60403 315 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 GPX5O75715 221 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 CPMP14384 443 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 TLX1P31314 330 aaPredicted RBP9.41□□□□□ -0.9
FOXN4-201ENST00000299162 DDOSTP39656 456 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 LIMS1P48059 325 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 GIPRP48546 466 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 RPS7P62081 194 aaKnown RBP9.41□□□□□ -0.9
FOXN4-201ENST00000299162 ZIC1Q15915 447 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 YIF1BQ5BJH7 314 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 C22orf42Q6IC83 251 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 PAQR7Q86WK9 346 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 COX18Q8N8Q8 333 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 ATP6V1C2Q8NEY4 427 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 OR4F15Q8NGB8 312 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 OR56A1Q8NGH5 318 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 APOBEC4Q8WW27 367 aaKnown RBP9.41□□□□□ -0.9
FOXN4-201ENST00000299162 BCL7BQ9BQE9 202 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 FAM60AQ9NP50 221 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 MAN2C1Q9NTJ4 1040 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 KLHL28Q9NXS3 571 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 PCDHGB1Q9Y5G3 927 aa9.41□□□□□ -0.9
FOXN4-201ENST00000299162 A0A0A6YYC8 382 aaPredicted RBP9.4□□□□□ -0.9
FOXN4-201ENST00000299162 I3L1I5 382 aaPredicted RBP9.4□□□□□ -0.9
FOXN4-201ENST00000299162 TOR1AO14656 332 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 CASC3O15234 703 aaKnown RBP9.4□□□□□ -0.9
FOXN4-201ENST00000299162 PRICKLE3O43900 615 aaPredicted RBP9.4□□□□□ -0.9
FOXN4-201ENST00000299162 THEGLP0DJG4 465 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 APEX1P27695 318 aaKnown RBP9.4□□□□□ -0.9
FOXN4-201ENST00000299162 AKT2P31751 481 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 GABRA3P34903 492 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 AHRP35869 848 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 ABATP80404 500 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 CSTF1Q05048 431 aaKnown RBP9.4□□□□□ -0.9
FOXN4-201ENST00000299162 ADAM15Q13444 863 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 HTR4Q13639 388 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 IL18Q14116 193 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 INSL4Q14641 139 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 SPHARQ15513 63 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 MAPK14Q16539 360 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 SLC22A18ASQ8N1D0 253 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 GATSQ8NAP1 163 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 BBS1Q8NFJ9 593 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 NLGN4YQ8NFZ3 816 aaPredicted RBP9.4□□□□□ -0.9
FOXN4-201ENST00000299162 DPH1Q9BZG8 443 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 FAM117AQ9C073 453 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 HDHD2Q9H0R4 259 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 TBC1D17Q9HA65 648 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 USP36Q9P275 1121 aaKnown RBP9.4□□□□□ -0.9
FOXN4-201ENST00000299162 NUP50Q9UKX7 468 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 PCOLCE2Q9UKZ9 415 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 SPTBN2O15020 2390 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 CSO75390 466 aaKnown RBP9.4□□□□□ -0.9
FOXN4-201ENST00000299162 LGI1O95970 557 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 HMGA2P52926 109 aa9.4□□□□□ -0.9
FOXN4-201ENST00000299162 RPL6Q02878 288 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms