RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 GPR176Q14439 515 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 SLC25A35Q3KQZ1 300 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 MRPL2Q5T653 305 aaKnown RBP22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 MFSD9Q8NBP5 474 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 PTP4A1Q93096 173 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 SDF2Q99470 211 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 TRPV5Q9NQA5 729 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 ACOXLQ9NUZ1 547 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 NLGN3Q9NZ94 848 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 MRPS7Q9Y2R9 242 aaKnown RBP22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 MRPS2Q9Y399 296 aaKnown RBP22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 HSPB11Q9Y547 144 aa22.67■■□□□ 1.22
SPTSSA-201ENST00000298130 UNC119BA6NIH7 251 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 GNB5O14775 395 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 SAGP10523 405 aaPredicted RBP22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 SRSF5Q13243 272 aaKnown RBP22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 CDC73Q6P1J9 531 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 NIPAL3Q6P499 406 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 MZT2AQ6P582 158 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 SLC37A3Q8NCC5 494 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 OR10G6Q8NH81 332 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 DEDD2Q8WXF8 326 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 SNAPC3Q92966 411 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 MOAP1Q96BY2 351 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 POM121BA6NF01 834 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 RGS9O75916 674 aaPredicted RBP22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 CLDN20P56880 219 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 EXOSC7Q15024 291 aaKnown RBP22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 ESPNLQ6ZVH7 1005 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 AMIGO1Q86WK6 493 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 GPR135Q8IZ08 494 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 ARL14Q8N4G2 192 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 OR52N1Q8NH53 320 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 CALML5Q9NZT1 146 aa22.66■■□□□ 1.22
SPTSSA-201ENST00000298130 TBC1D3DA0A087WVF3 549 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 TBC1D3IA0A087WXS9 549 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 TBC1D3EA0A087X179 549 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 TBC1D3KA0A087X1G2 549 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 TBC1D3FA6NER0 549 aaPredicted RBP22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 TBC1D3LB9A6J9 549 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 HLA-DQB1P01920 261 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 SYPP08247 313 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 TBC1D3HP0C7X1 549 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 OR12D2P58182 307 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 BCL2L15Q5TBC7 163 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 TBC1D3GQ6DHY5 549 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 TBC1D3CQ6IPX1 549 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 TRILQ7L0X0 811 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 TBC1D3Q8IZP1 549 aaPredicted RBP22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 OR5W2Q8NH69 310 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 MTHFD2LQ9H903 347 aaPredicted RBP22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 MAT2BQ9NZL9 334 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 OR5F1O95221 314 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 IL9P15248 144 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 GZMKP49863 264 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 ADAM15Q13444 863 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 OR1Q1Q15612 314 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 ZNF425Q6IV72 752 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 DUSP18Q8NEJ0 188 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 OR5T3Q8NGG3 340 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 RIPOR3Q96MK2 946 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 MS4A4EQ96PG1 132 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 CD180Q99467 661 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 KCNJ15Q99712 375 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 SLC17A9Q9BYT1 436 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 IRF2BPLQ9H1B7 796 aa22.65■■□□□ 1.22
SPTSSA-201ENST00000298130 MUC22E2RYF6 1773 aaPredicted RBP22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 LOC105369274A0A096LPK9 316 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 NOTOA8MTQ0 251 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 CTSVO60911 334 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 RFPL3O75679 317 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 RUNX3Q13761 415 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 TMEM31Q5JXX7 168 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 HEPHL1Q6MZM0 1159 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 MEPCEQ7L2J0 689 aaKnown RBP22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 CEACAM19Q7Z692 300 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 ZAR1Q86SH2 424 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 TIGD4Q8IY51 512 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 OR4N4Q8N0Y3 316 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 PHF21AQ96BD5 680 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 THAP7Q9BT49 309 aaPredicted RBP22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 SLA2Q9H6Q3 261 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 CD93Q9NPY3 652 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 CLDND1Q9NY35 253 aa22.64■■□□□ 1.22
SPTSSA-201ENST00000298130 CENPBD1B2RD01 187 aa22.64■■□□□ 1.21
SPTSSA-201ENST00000298130 J3QRE1 110 aa22.64■■□□□ 1.21
SPTSSA-201ENST00000298130 BMP7P18075 431 aa22.64■■□□□ 1.21
SPTSSA-201ENST00000298130 SF3A2Q15428 464 aaKnown RBP22.64■■□□□ 1.21
SPTSSA-201ENST00000298130 FBXO42Q6P3S6 717 aa22.64■■□□□ 1.21
SPTSSA-201ENST00000298130 TSACCQ96A04 125 aaPredicted RBP22.64■■□□□ 1.21
SPTSSA-201ENST00000298130 C4orf36Q96KX1 117 aa22.64■■□□□ 1.21
SPTSSA-201ENST00000298130 ABHD1Q96SE0 405 aa22.64■■□□□ 1.21
SPTSSA-201ENST00000298130 KXD1Q9BQD3 176 aa22.64■■□□□ 1.21
SPTSSA-201ENST00000298130 ABCG5Q9H222 651 aa22.64■■□□□ 1.21
SPTSSA-201ENST00000298130 SLC28A3Q9HAS3 691 aa22.64■■□□□ 1.21
SPTSSA-201ENST00000298130 A0A1W2PRG6 482 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 RNGTTO60942 597 aaKnown RBP22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 ZNF780AO75290 641 aaPredicted RBP22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 HMGN1P05114 100 aa22.63■■□□□ 1.21
SPTSSA-201ENST00000298130 PRPF38BQ5VTL8 546 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms