RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TAF4O00268 1085 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 OR10H2O60403 315 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 PLOD3O60568 738 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 SNX4O95219 450 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 OR5F1O95221 314 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 CD8BP10966 210 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 MYF5P13349 255 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 NID1P14543 1247 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 EIF2B2P49770 351 aaKnown RBP10.9□□□□□ -0.66
RHO-201ENST00000296271 HCCSP53701 268 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 GFERP55789 205 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 RAB40BQ12829 278 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 CCDC85BQ15834 202 aaPredicted RBP10.9□□□□□ -0.66
RHO-201ENST00000296271 KLHL12Q53G59 568 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 C3orf38Q5JPI3 329 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 SPANXN2Q5MJ10 180 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 PRAMEF17Q5VTA0 474 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 NKAIN2Q5VXU1 208 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 LAPTM4BQ86VI4 370 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 LINC00471Q8N535 108 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 DTX3Q8N9I9 347 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 TMEM239Q8WW34 195 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 SPRYD4Q8WW59 207 aaPredicted RBP10.9□□□□□ -0.66
RHO-201ENST00000296271 CEP19Q96LK0 163 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 SLC30A2Q9BRI3 323 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 GSDMCQ9BYG8 508 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 LYRM4Q9HD34 91 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 MALT1Q9UDY8 824 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 TBC1D24Q9ULP9 559 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 PEX16Q9Y5Y5 336 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 AQP9O43315 295 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 FOXS1O43638 330 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 IL9P15248 144 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 RPS4Y1P22090 263 aaKnown RBP10.9□□□□□ -0.66
RHO-201ENST00000296271 ATP6V1E1P36543 226 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 IFNGR2P38484 337 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 MAP3K8P41279 467 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 PGDP52209 483 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 NKX2-5P52952 324 aaPredicted RBP10.9□□□□□ -0.66
RHO-201ENST00000296271 SLC16A1P53985 500 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 KCNAB1Q14722 419 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 KLHL22Q53GT1 634 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 EXOSC6Q5RKV6 272 aaKnown RBP10.9□□□□□ -0.66
RHO-201ENST00000296271 AGAP7PQ5VUJ5 663 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 VASNQ6EMK4 673 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 KLBQ86Z14 1044 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 MCATQ8IVS2 390 aaKnown RBP10.9□□□□□ -0.66
RHO-201ENST00000296271 VWA5B2Q8N398 1253 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 ARHGEF39Q8N4T4 335 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 RELTQ969Z4 430 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 TP53INP1Q96A56 240 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 CTHRC1Q96CG8 243 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 CLIP3Q96DZ5 547 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 DNAJA3Q96EY1 480 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 TIMP4Q99727 224 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 KLHDC3Q9BQ90 382 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 FGF20Q9NP95 211 aaPredicted RBP10.9□□□□□ -0.66
RHO-201ENST00000296271 WSB2Q9NYS7 404 aaPredicted RBP10.9□□□□□ -0.66
RHO-201ENST00000296271 NLGN3Q9NZ94 848 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 CA14Q9ULX7 337 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 CDH10Q9Y6N8 788 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 MAU2Q9Y6X3 613 aa10.9□□□□□ -0.66
RHO-201ENST00000296271 RP1P56715 2156 aa10.9□□□□□ -0.67
RHO-201ENST00000296271 TRAPPC13A5PLN9 417 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 UNC119BA6NIH7 251 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 BRINP1O60477 761 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 STAT5AP42229 794 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 SLC9A3P48764 834 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 RORCP51449 518 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 FOXL2P58012 376 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 POU6F2P78424 691 aaPredicted RBP10.89□□□□□ -0.67
RHO-201ENST00000296271 ZNF267Q14586 743 aaPredicted RBP10.89□□□□□ -0.67
RHO-201ENST00000296271 CCBE1Q6UXH8 406 aaPredicted RBP10.89□□□□□ -0.67
RHO-201ENST00000296271 NPSR1Q6W5P4 371 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 CXXC5Q7LFL8 322 aaKnown RBP10.89□□□□□ -0.67
RHO-201ENST00000296271 GATAD2AQ86YP4 633 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 ARL14Q8N4G2 192 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 RFLNBQ8N5W9 214 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 LRRC17Q8N6Y2 441 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 CDRT4Q8N9R6 151 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 GATSQ8NAP1 163 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 OR2T33Q8NG76 320 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 OR51L1Q8NGJ5 315 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 FANK1Q8TC84 345 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 OSTF1Q92882 214 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 PTP4A1Q93096 173 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 ARHGAP9Q9BRR9 750 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 KATNB1Q9BVA0 655 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 OR51V1Q9H2C8 321 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 C8orf33Q9H7E9 229 aaPredicted RBP10.89□□□□□ -0.67
RHO-201ENST00000296271 ANKHQ9HCJ1 492 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 LRIT1Q9P2V4 623 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 POMT2Q9UKY4 750 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 CLDN16Q9Y5I7 305 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 A0A1W2PQL4 384 aaPredicted RBP10.89□□□□□ -0.67
RHO-201ENST00000296271 C4orf47A7E2U8 309 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 C17orf51A8MQB3 221 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 C10orf142B7Z368 130 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 E9PI62 339 aa10.89□□□□□ -0.67
RHO-201ENST00000296271 SAGP10523 405 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms