RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 ZNF704Q6ZNC4 412 aaPredicted RBP17.52■□□□□ 0.4
CXCL3-201ENST00000296026 GTF2IRD2Q86UP8 949 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 TRABD2AQ86V40 505 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 WFDC8Q8IUA0 241 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 HOMEZQ8IX15 550 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 OR7A2PQ8NGA2 310 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 PHOSPHO1Q8TCT1 267 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 ROBO4Q8WZ75 1007 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 STACQ99469 402 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 GSX2Q9BZM3 304 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 ACTR6Q9GZN1 396 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 PIGUQ9H490 435 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 DUSP22Q9NRW4 184 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 GIMAP2Q9UG22 337 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 SNX8Q9Y5X2 465 aa17.52■□□□□ 0.4
CXCL3-201ENST00000296026 ARID1AO14497 2285 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 TRIM64A6NGJ6 449 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 TRIM64BA6NI03 449 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 TMEM114B3SHH9 223 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 PLAUP00749 431 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 ATP6V1C1P21283 382 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 MAPK1P28482 360 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 SHC1P29353 583 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 ALDH3A1P30838 453 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 SFTPDP35247 375 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 EIF1P41567 113 aaKnown RBP17.51■□□□□ 0.39
CXCL3-201ENST00000296026 PTH2RP49190 550 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 NR1H2P55055 460 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 ZNF117Q03924 483 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 FOXF1Q12946 379 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 ARL13AQ5H913 290 aaPredicted RBP17.51■□□□□ 0.39
CXCL3-201ENST00000296026 PLPPR2Q96GM1 343 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 APOPT1Q96IL0 206 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 PPP3R2Q96LZ3 170 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 GIN1Q9NXP7 522 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 GPR52Q9Y2T5 361 aa17.51■□□□□ 0.39
CXCL3-201ENST00000296026 TLDC2A0PJX2 215 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 NPHS1O60500 1241 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 PEX11AO75192 247 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 NUDT14O95848 222 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 LAMP1P11279 417 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 PSMB1P20618 241 aaKnown RBP17.5■□□□□ 0.39
CXCL3-201ENST00000296026 RPL3P39023 403 aaKnown RBP17.5■□□□□ 0.39
CXCL3-201ENST00000296026 CCT3P49368 545 aaKnown RBP17.5■□□□□ 0.39
CXCL3-201ENST00000296026 RNF144AP50876 292 aaPredicted RBP17.5■□□□□ 0.39
CXCL3-201ENST00000296026 ZNF239Q16600 458 aaKnown RBP17.5■□□□□ 0.39
CXCL3-201ENST00000296026 CDC73Q6P1J9 531 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 CBLN3Q6UW01 205 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 MTERF4Q7Z6M4 381 aaKnown RBP17.5■□□□□ 0.39
CXCL3-201ENST00000296026 AGR3Q8TD06 166 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 NUDT8Q8WV74 236 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 TMEM171Q8WVE6 324 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 IGFBPL1Q8WX77 278 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 REXO5Q96IC2 774 aaKnown RBP17.5■□□□□ 0.39
CXCL3-201ENST00000296026 MECRQ9BV79 373 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 ACTRT3Q9BYD9 372 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 OR10A4Q9H209 315 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 EML4Q9HC35 981 aaKnown RBP17.5■□□□□ 0.39
CXCL3-201ENST00000296026 MKS1Q9NXB0 559 aa17.5■□□□□ 0.39
CXCL3-201ENST00000296026 NPIPA5A0A0B4J1W7 369 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 NPIPA7E9PJI5 369 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 OIP5O43482 229 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 EFNA2O43921 213 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 PABPC4LP0CB38 370 aaKnown RBP17.49■□□□□ 0.39
CXCL3-201ENST00000296026 NPIPA8P0DM63 369 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 NID1P14543 1247 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 ELK4P28324 431 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 P2RX1P51575 399 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 TP53BP2Q13625 1128 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 PTGR1Q14914 329 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 TMEM201Q5SNT2 666 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 DCST2Q5T1A1 773 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 BANPQ8N9N5 519 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 ZNF527Q8NB42 609 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 FBXO27Q8NI29 283 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 ADAMTS15Q8TE58 950 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 RNF128Q8TEB7 428 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 ABHD3Q8WU67 409 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 OR5P2Q8WZ92 322 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 CPNE4Q96A23 557 aaPredicted RBP17.49■□□□□ 0.39
CXCL3-201ENST00000296026 SRXN1Q9BYN0 137 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 HOXD1Q9GZZ0 328 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 CXorf36Q9H7Y0 433 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 TIGARQ9NQ88 270 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 SLC17A7Q9P2U7 560 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 CARD8Q9Y2G2 431 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 KCNE3Q9Y6H6 103 aa17.49■□□□□ 0.39
CXCL3-201ENST00000296026 NSD1Q96L73 2696 aaPredicted RBP17.48■□□□□ 0.39
CXCL3-201ENST00000296026 ABCA2Q9BZC7 2435 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 ZNF195O14628 629 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 CNOT4O95628 575 aaKnown RBP17.48■□□□□ 0.39
CXCL3-201ENST00000296026 ADH6P28332 368 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 SPDYE7PQ495Y7 208 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 KLHL26Q53HC5 615 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 XKR7Q5GH72 579 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 ALKBH2Q6NS38 261 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 ZCCHC23Q6ZST2 131 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 OR56A1Q8NGH5 318 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 OR2W6PQ8NHA6 318 aa17.48■□□□□ 0.39
CXCL3-201ENST00000296026 PSMA8Q8TAA3 256 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms