RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PSMD4P55036 377 aaKnown RBP8.45□□□□□ -1.06
PDPN-201ENST00000294489 SNAP47Q5SQN1 464 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 PDZK1Q5T2W1 519 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 SLC46A3Q7Z3Q1 461 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 SLCO6A1Q86UG4 719 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 CDK20Q8IZL9 346 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 TMEM163Q8TC26 289 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 PTPMT1Q8WUK0 201 aaPredicted RBP8.45□□□□□ -1.06
PDPN-201ENST00000294489 PLEKHA8Q96JA3 519 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 ZNF559Q9BR84 538 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 OR10A5Q9H207 317 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 DSN1Q9H410 356 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 ZNF304Q9HCX3 659 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 IL20Q9NYY1 176 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 ATXN7L1Q9ULK2 861 aaPredicted RBP8.45□□□□□ -1.06
PDPN-201ENST00000294489 OR10H1Q9Y4A9 318 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 MAU2Q9Y6X3 613 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 TCRBV16S1A1N1A0A5B0 115 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 IRGMA1A4Y4 181 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 HRKO00198 91 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 HTR2AP28223 471 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 AVPR2P30518 371 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 DUSP3P51452 185 aaPredicted RBP8.45□□□□□ -1.06
PDPN-201ENST00000294489 NCS1P62166 190 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 ANGPT1Q15389 498 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 ZNF829Q3KNS6 432 aaPredicted RBP8.45□□□□□ -1.06
PDPN-201ENST00000294489 KLHL22Q53GT1 634 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 SYT14P1Q58G82 188 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 CLEC12AQ5QGZ9 265 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 C1QTNF12Q5T7M4 302 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 ZNF613Q6PF04 617 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 NPSR1Q6W5P4 371 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 MRGPREQ86SM8 312 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 SLC34A3Q8N130 599 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 NDNFQ8TB73 568 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 IFI44Q8TCB0 444 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.45□□□□□ -1.06
PDPN-201ENST00000294489 TMEM239Q8WW34 195 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 SLC35B4Q969S0 331 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 ZHX1-C8orf76Q96EF9 292 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 PTCHD1Q96NR3 888 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 MGLLQ99685 303 aa8.45□□□□□ -1.06
PDPN-201ENST00000294489 MKKSQ9NPJ1 570 aaPredicted RBP8.45□□□□□ -1.06
PDPN-201ENST00000294489 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.45□□□□□ -1.06
PDPN-201ENST00000294489 CPED1A4D0V7 1026 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 OR2W5A6NFC9 320 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 KLF4O43474 513 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 NTN1O95631 604 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 IGKV3-11P04433 115 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 ATXN8OSP0DMR3 200 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 FBLP22087 321 aaKnown RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 RGS6P49758 472 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 EFNB1P98172 346 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 ZFP36L1Q07352 338 aaKnown RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 TRA2AQ13595 282 aaKnown RBP eCLIP8.44□□□□□ -1.06
PDPN-201ENST00000294489 C1DQ13901 141 aaKnown RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 TMEM44Q2T9K0 475 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 TIMM50Q3ZCQ8 353 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 ZNF385CQ66K41 422 aaPredicted RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 ZNF620Q6ZNG0 422 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 LINC00299Q6ZSB3 139 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 BCDIN3DQ7Z5W3 292 aaKnown RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 ZAR1Q86SH2 424 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 ADCK1Q86TW2 530 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 BPHLQ86WA6 291 aaPredicted RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 GRAMD2AQ8IUY3 354 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 CLDN22Q8N7P3 220 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 RCBTB1Q8NDN9 531 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 PLPP5Q8NEB5 264 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 OR4N2Q8NGD1 307 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 OR8D4Q8NGM9 314 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 C16orf52Q8NHV5 167 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 RPL3LQ92901 407 aaKnown RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 BORCS5Q969J3 196 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 CCDC74BQ96LY2 380 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 ZNF582Q96NG8 517 aaPredicted RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 PRSS27Q9BQR3 290 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 MND1Q9BWT6 205 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 RACGAP1Q9H0H5 632 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 SLC22A11Q9NSA0 550 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 TAS2R16Q9NYV7 291 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 CDH10Q9Y6N8 788 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 A8MU76 341 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 C17orf105B2RV13 164 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 PRODHO43272 600 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 PIP5K1CO60331 668 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 NADKO95544 446 aaPredicted RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 GP1BAP07359 652 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 CT45A8P0DMV1 189 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 CT45A9P0DMV2 189 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 OR1D4P47884 311 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 RNF144AP50876 292 aaPredicted RBP8.44□□□□□ -1.06
PDPN-201ENST00000294489 TUBA1BP68363 451 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 PLAURQ03405 335 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 ZNF141Q15928 474 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 CT45A2Q5DJT8 189 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 RNLSQ5VYX0 342 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 TUBA1AQ71U36 451 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 ZBTB46Q86UZ6 589 aa8.44□□□□□ -1.06
PDPN-201ENST00000294489 OR2T33Q8NG76 320 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms