RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 WNT4P56705 351 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 HNRNPKP61978 463 aaKnown RBP eCLIP12.95□□□□□ -0.34
NXF1-201ENST00000294172 FAM53BQ14153 422 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 CPOQ8IVL8 374 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 CDK20Q8IZL9 346 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 RNF113BQ8IZP6 322 aaKnown RBP12.95□□□□□ -0.34
NXF1-201ENST00000294172 RCBTB1Q8NDN9 531 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 CADM4Q8NFZ8 388 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 OR6C4Q8NGE1 309 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 OR52L1Q8NGH7 329 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 OR51Q1Q8NH59 317 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 BPIFA2Q96DR5 249 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 HS6ST2Q96MM7 605 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 NXF2Q9GZY0 626 aaKnown RBP12.95□□□□□ -0.34
NXF1-201ENST00000294172 ENKD1Q9H0I2 346 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 POLE3Q9NRF9 147 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 SSR3Q9UNL2 185 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 A3GALT2U3KPV4 340 aa12.95□□□□□ -0.34
NXF1-201ENST00000294172 PRKNO60260 465 aaPredicted RBP12.94□□□□□ -0.34
NXF1-201ENST00000294172 FMO6PO60774 539 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 ADAM11O75078 769 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 HMGN1P05114 100 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 BMP7P18075 431 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 ENDOUP21128 410 aaKnown RBP12.94□□□□□ -0.34
NXF1-201ENST00000294172 RPS19P39019 145 aaKnown RBP12.94□□□□□ -0.34
NXF1-201ENST00000294172 CD79BP40259 229 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 SEPHS1P49903 392 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 DBPQ10586 325 aaPredicted RBP12.94□□□□□ -0.34
NXF1-201ENST00000294172 DNASE1L3Q13609 305 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 AMZ1Q400G9 498 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 B3GLCTQ6Y288 498 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 LAPTM4BQ86VI4 370 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 SIX5Q8N196 739 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 OR13C2Q8NGS9 318 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 PMM1Q92871 262 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 NEURL2Q9BR09 285 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 ZNF559Q9BR84 538 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 TPK1Q9H3S4 243 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 UCK1Q9HA47 277 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 POLE4Q9NR33 117 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 ABCB10Q9NRK6 738 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 SNTG1Q9NSN8 517 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 TOR4AQ9NXH8 423 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 QPCTLQ9NXS2 382 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 MED31Q9Y3C7 131 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 OR10H1Q9Y4A9 318 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 THADAQ6YHU6 1953 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 TLCD2A6NGC4 264 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 LMO7DNF2Z398 122 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 SOCS6O14544 535 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 LRRTM2O43300 516 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 PRAMEF2O60811 474 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 CD40LGP29965 261 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 GABRA4P48169 554 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 NXPH1P58417 271 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 PRKCDQ05655 676 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 PTCRAQ6ISU1 281 aaPredicted RBP12.94□□□□□ -0.34
NXF1-201ENST00000294172 PLBD1Q6P4A8 553 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 NPSR1Q6W5P4 371 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 CADM2Q8N3J6 435 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 OR51A7Q8NH64 312 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 TM9SF4Q92544 642 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 HOXB13Q92826 284 aaPredicted RBP12.94□□□□□ -0.34
NXF1-201ENST00000294172 CLIP3Q96DZ5 547 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 AHCYL2Q96HN2 611 aaKnown RBP12.94□□□□□ -0.34
NXF1-201ENST00000294172 NELL2Q99435 816 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 Q9N2J8 555 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 HINT3Q9NQE9 182 aaKnown RBP12.94□□□□□ -0.34
NXF1-201ENST00000294172 MED17Q9NVC6 651 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 C14orf105Q9NVL8 296 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 FLRT3Q9NZU0 649 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 CBLCQ9ULV8 474 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 YARS2Q9Y2Z4 477 aaKnown RBP12.94□□□□□ -0.34
NXF1-201ENST00000294172 EXOSC1Q9Y3B2 195 aaKnown RBP12.94□□□□□ -0.34
NXF1-201ENST00000294172 PEX16Q9Y5Y5 336 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 TMEM131Q92545 1883 aa12.94□□□□□ -0.34
NXF1-201ENST00000294172 SEC16AO15027 2179 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 PCDH15Q96QU1 1955 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 CABIN1Q9Y6J0 2220 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 TRAV27A0A087WT01 109 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 A0A1B0GWA3 101 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 TMEM129A0AVI4 362 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 LIMS3P0CW19 117 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 LIMS4P0CW20 117 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 CPEP16870 476 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 ALAS2P22557 587 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 FXYD6P3P58550 94 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 BNC1Q01954 994 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 MXD1Q05195 221 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 C14orf28Q4W4Y0 310 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 SNAP47Q5SQN1 464 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 ZNF613Q6PF04 617 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 CXXC5Q7LFL8 322 aaKnown RBP12.93□□□□□ -0.34
NXF1-201ENST00000294172 BMP8AQ7Z5Y6 402 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 GATAD2AQ86YP4 633 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 CLDN22Q8N7P3 220 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 ZFP41Q8N8Y5 198 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 C16orf52Q8NHV5 167 aa12.93□□□□□ -0.34
NXF1-201ENST00000294172 BRIX1Q8TDN6 353 aaKnown RBP12.93□□□□□ -0.34
NXF1-201ENST00000294172 ZDHHC12Q96GR4 267 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms