RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 ICAM5Q9UMF0 924 aa12.1□□□□□ -0.47
VPS28-201ENST00000292510 LIPT1Q9Y234 373 aa12.1□□□□□ -0.47
VPS28-201ENST00000292510 L3MBTL1Q9Y468 752 aa12.1□□□□□ -0.47
VPS28-201ENST00000292510 ICE1Q9Y2F5 2266 aa12.1□□□□□ -0.47
VPS28-201ENST00000292510 H0YC42 278 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 WDR1O75083 606 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 CYP7B1O75881 506 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 CLDN1O95832 211 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 GUSBP08236 651 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 TFPTP0C1Z6 253 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 UBL4AP11441 157 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 GCKP35557 465 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 LHX2P50458 406 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 P2RX1P51575 399 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 CCR4P51679 360 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 TPD52P55327 224 aaPredicted RBP12.09□□□□□ -0.47
VPS28-201ENST00000292510 NUP107P57740 925 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 PMPCAQ10713 525 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 SKP2Q13309 424 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 NFYCQ13952 458 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 CAPRIN1Q14444 709 aaKnown RBP12.09□□□□□ -0.47
VPS28-201ENST00000292510 FGFBP1Q14512 234 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 CDSNQ15517 529 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 TOMM34Q15785 309 aaPredicted RBP12.09□□□□□ -0.47
VPS28-201ENST00000292510 AAGABQ6PD74 315 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 PLXDC2Q6UX71 529 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 B3GNT6Q6ZMB0 384 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 MRGPRGQ86SM5 289 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 EID3Q8N140 333 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 DPP10Q8N608 796 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 PHF10Q8WUB8 498 aaKnown RBP12.09□□□□□ -0.47
VPS28-201ENST00000292510 SLC38A5Q8WUX1 472 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 TMEM19Q96HH6 336 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 ZNF337Q9Y3M9 751 aa12.09□□□□□ -0.47
VPS28-201ENST00000292510 SETXQ7Z333 2677 aaKnown RBP12.09□□□□□ -0.47
VPS28-201ENST00000292510 LOC100653049A0A140TA62 436 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 GMNCA6NCL1 334 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 H3BML4 177 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 ZNF264O43296 627 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 KRT34O76011 436 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 NUDT14O95848 222 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 CSTAP01040 98 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 UBTFL6P0CB48 400 aaPredicted RBP12.08□□□□□ -0.48
VPS28-201ENST00000292510 GLI4P10075 376 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 GABRA1P14867 456 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 ZNF708P17019 499 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 POU3F2P20265 443 aaPredicted RBP12.08□□□□□ -0.48
VPS28-201ENST00000292510 CHMP24386 653 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 MAGEA8P43361 318 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 SUCLG1P53597 346 aaKnown RBP12.08□□□□□ -0.48
VPS28-201ENST00000292510 CLDN18P56856 261 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 PLAURQ03405 335 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 FADDQ13158 208 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 SELPLGQ14242 412 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 TMEM44Q2T9K0 475 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 PLPPR5Q32ZL2 321 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 ACSF3Q4G176 576 aaPredicted RBP12.08□□□□□ -0.48
VPS28-201ENST00000292510 RUNDC3AQ59EK9 446 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 AP1ARQ63HQ0 302 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 MTFR2Q6P444 385 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 ENPP6Q6UWR7 440 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 SEM1Q6ZVN7 128 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 EIF3MQ7L2H7 374 aaKnown RBP12.08□□□□□ -0.48
VPS28-201ENST00000292510 SNX32Q86XE0 403 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 PM20D2Q8IYS1 436 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 UBQLNLQ8IYU4 475 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 POC1BQ8TC44 478 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 TSPEARQ8WU66 669 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 SMPDL3BQ92485 455 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 RNF145Q96MT1 663 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 TRIB1Q96RU8 372 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 CGREF1Q99674 301 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 TUBA1CQ9BQE3 449 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 PIGQQ9BRB3 760 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 CPPED1Q9BRF8 314 aaPredicted RBP12.08□□□□□ -0.48
VPS28-201ENST00000292510 TTYH2Q9BSA4 534 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 RAD21L1Q9H4I0 556 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 HHATLQ9HCP6 504 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 CAPN7Q9Y6W3 813 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 NBPF19A0A087WUL8 3843 aa12.08□□□□□ -0.48
VPS28-201ENST00000292510 A0A087WZY1 265 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 AGAP5A6NIR3 686 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 AHRRA9YTQ3 701 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 FAM47E-STBD1D6RA91 191 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 H0Y3Z8 333 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 SEC14L5O43304 696 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 EIF4E2O60573 245 aaKnown RBP12.07□□□□□ -0.48
VPS28-201ENST00000292510 OPN1LWP04000 364 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 LINGO3P0C6S8 592 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 BMP2P12643 396 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 CPN1P15169 458 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 IL11P20809 199 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 PGM1P36871 562 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 ADH7P40394 386 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 ZNF41P51814 821 aaPredicted RBP12.07□□□□□ -0.48
VPS28-201ENST00000292510 SMSP52788 366 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 CRISP3P54108 245 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 CLDN15P56746 228 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 CLDN20P56880 219 aa12.07□□□□□ -0.48
VPS28-201ENST00000292510 MTPNP58546 118 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms