RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 UBQLN3Q9H347 655 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 ABCB10Q9NRK6 738 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 SIDT1Q9NXL6 827 aaKnown RBP17.64■□□□□ 0.41
SHF-201ENST00000290894 CDH10Q9Y6N8 788 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 NUDT1P36639 197 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 RPS19P39019 145 aaKnown RBP17.64■□□□□ 0.41
SHF-201ENST00000290894 CRYBB2P43320 205 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 ZNHIT3Q15649 155 aaPredicted RBP17.64■□□□□ 0.41
SHF-201ENST00000290894 TRIM16LQ309B1 348 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 PTCRAQ6ISU1 281 aaPredicted RBP17.64■□□□□ 0.41
SHF-201ENST00000290894 ZCCHC12Q6PEW1 402 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 MRGPREQ86SM8 312 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 OR51Q1Q8NH59 317 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 FANK1Q8TC84 345 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.64■□□□□ 0.41
SHF-201ENST00000290894 RACGAP1Q9H0H5 632 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 HINT3Q9NQE9 182 aaKnown RBP17.64■□□□□ 0.41
SHF-201ENST00000290894 FLRT3Q9NZU0 649 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 B3GNT3Q9Y2A9 372 aa17.64■□□□□ 0.41
SHF-201ENST00000290894 CTDSP2O14595 271 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 CTNSO60931 367 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 LYPD3O95274 346 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 PSMA1P25786 263 aaKnown RBP17.63■□□□□ 0.41
SHF-201ENST00000290894 OR1D4P47884 311 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 OR1D5P58170 312 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 TIMM50Q3ZCQ8 353 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 THSD4Q6ZMP0 1018 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 CADM2Q8N3J6 435 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 VSTM2LQ96N03 204 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 ASPNQ9BXN1 380 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 MEPEQ9NQ76 525 aaPredicted RBP17.63■□□□□ 0.41
SHF-201ENST00000290894 MRPS33Q9Y291 106 aaKnown RBP17.63■□□□□ 0.41
SHF-201ENST00000290894 UNC119BA6NIH7 251 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 A8MUA0 341 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 ATP6V1E1P36543 226 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 GABRA4P48169 554 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 BNC1Q01954 994 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 MINDY4Q4G0A6 757 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 KLHL22Q53GT1 634 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 PLBD1Q6P4A8 553 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 TTLL10Q6ZVT0 673 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 C16orf52Q8NHV5 167 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 TM9SF2Q99805 663 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 SNTG1Q9NSN8 517 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 WDR70Q9NW82 654 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 LRIT1Q9P2V4 623 aa17.63■□□□□ 0.41
SHF-201ENST00000290894 ZNF223Q9UK11 482 aaPredicted RBP17.63■□□□□ 0.41
SHF-201ENST00000290894 CAB39Q9Y376 341 aaPredicted RBP17.63■□□□□ 0.41
SHF-201ENST00000290894 RHPN2P1A8MT19 583 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 A8MU76 341 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 KDM4EB2RXH2 506 aaPredicted RBP17.62■□□□□ 0.41
SHF-201ENST00000290894 CLDN4O14493 209 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 PLD2O14939 933 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 NSA2O95478 260 aaKnown RBP17.62■□□□□ 0.41
SHF-201ENST00000290894 RAB40BQ12829 278 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 Q8N9G6 341 aaPredicted RBP17.62■□□□□ 0.41
SHF-201ENST00000290894 OR9Q1Q8NGQ5 310 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 BPIFA2Q96DR5 249 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 CD180Q99467 661 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 HCAR1Q9BXC0 346 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 NUAK2Q9H093 628 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 PDE7BQ9NP56 450 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 NDUFB11Q9NX14 153 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 DHCR7Q9UBM7 475 aaKnown RBP17.62■□□□□ 0.41
SHF-201ENST00000290894 PLCL2Q9UPR0 1127 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 OR10H1Q9Y4A9 318 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 RNF215Q9Y6U7 377 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 MPDZO75970 2070 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 A0A1B0GWA3 101 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 FUOMA2VDF0 154 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 TBX1O43435 398 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 LIMS3P0CW19 117 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 LIMS4P0CW20 117 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 MLLT11Q13015 90 aaPredicted RBP17.62■□□□□ 0.41
SHF-201ENST00000290894 ZNF791Q3KP31 576 aaPredicted RBP17.62■□□□□ 0.41
SHF-201ENST00000290894 AADACL4Q5VUY2 407 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 GATAD2AQ86YP4 633 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 ZNF321PQ8N8H1 164 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 GATSQ8NAP1 163 aa17.62■□□□□ 0.41
SHF-201ENST00000290894 LMO7DNF2Z398 122 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 LALBAP00709 142 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 NGFRP08138 427 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 TSPAN19P0C672 248 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 CT45A8P0DMV1 189 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 CT45A9P0DMV2 189 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 CD1CP29017 333 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 GTF2E2P29084 291 aaKnown RBP17.61■□□□□ 0.41
SHF-201ENST00000290894 S100A5P33763 92 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 WNT4P56705 351 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 HNRNPKP61978 463 aaKnown RBP eCLIP17.61■□□□□ 0.41
SHF-201ENST00000290894 CT45A2Q5DJT8 189 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 C22orf42Q6IC83 251 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 OR4C3Q8NH37 302 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 EFHD2Q96C19 240 aaPredicted RBP17.61■□□□□ 0.41
SHF-201ENST00000290894 TBX5Q99593 518 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.61■□□□□ 0.41
SHF-201ENST00000290894 PRRG3Q9BZD7 231 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 BARHL1Q9BZE3 327 aa17.61■□□□□ 0.41
SHF-201ENST00000290894 DNAJB12Q9NXW2 375 aaKnown RBP17.61■□□□□ 0.41
SHF-201ENST00000290894 ASCC3Q8N3C0 2202 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms