RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 AMIGO2Q86SJ2 522 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 LAPTM4BQ86VI4 370 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 SHISA5Q8N114 240 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 CCDC54Q8NEL0 328 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 OR5L2Q8NGL0 311 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 TEX47Q8TBZ9 253 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 AURKBQ96GD4 344 aaPredicted RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 G6PC3Q9BUM1 346 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 RACGAP1Q9H0H5 632 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 GPN2Q9H9Y4 310 aaPredicted RBP7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 ERVK-19Q9WJR5 959 aa7.8□□□□□ -1.16
PTPDC1-201ENST00000288976 CXCR6O00574 342 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 OPN1LWP04000 364 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 UGT2B15P54855 530 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC26A5P58743 744 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF57Q68EA5 555 aaPredicted RBP7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 REEP3Q6NUK4 255 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 PPP1R32Q7Z5V6 425 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 CLEC1AQ8NC01 280 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC35B4Q969S0 331 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 ADIPOR1Q96A54 375 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 SENP5Q96HI0 755 aaPredicted RBP7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 IMMP1LQ96LU5 166 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 COL21A1Q96P44 957 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 DPH1Q9BZG8 443 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF350Q9GZX5 532 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 GPR55Q9Y2T6 319 aaPredicted RBP7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 PCDHGA10Q9Y5H3 936 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 LOC101059948A0A1B0GTJ6 334 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 FOXK1P85037 733 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 PPP2R2BQ00005 443 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 LGALS3BPQ08380 585 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 FAM180BQ6P0A1 224 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 FRRS1Q6ZNA5 592 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 LANCL3Q6ZV70 420 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 HIPK1Q86Z02 1210 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 GPALPP1Q8IXQ4 340 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 WWTR1Q9GZV5 400 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC24A3Q9HC58 644 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 Q9N2J8 555 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 RASSF1Q9NS23 344 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 UPB1Q9UBR1 384 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 RPS6KA6Q9UK32 745 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 NUP50Q9UKX7 468 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 SPATA2Q9UM82 520 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 SAMD4AQ9UPU9 718 aaKnown RBP7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 RPH3AQ9Y2J0 694 aaPredicted RBP7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 FASNP49327 2511 aaKnown RBP7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 TCRBV5S2A0A599 114 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 TCRBV3S1A0A5B6 114 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 FAM149AA5PLN7 773 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 PRODHO43272 600 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 ARHGEF9O43307 516 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 KIAA0513O60268 411 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 NGFRP08138 427 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 NAGAP17050 411 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 RPS4Y1P22090 263 aaKnown RBP7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 CLCN2P51788 898 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 CDK6Q00534 326 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 CEP78Q5JTW2 689 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 ZFP1Q6P2D0 407 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 AAGABQ6PD74 315 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 FAM199XQ6PEV8 388 aaPredicted RBP7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 LINC00696Q6ZRV3 163 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 CNEP1R1Q8N9A8 125 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 SETD6Q8TBK2 473 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 HS3ST3B1Q9Y662 390 aa7.79□□□□□ -1.16
PTPDC1-201ENST00000288976 hCG_1807616A0A1W2PRN6 198 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SCDO00767 359 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 IDH3BO43837 385 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 GPIP06744 558 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 ETFAP13804 333 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 POU6F2P78424 691 aaPredicted RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 GK3PQ14409 553 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 EBPQ15125 230 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 MAPK11Q15759 364 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 ODF4Q2M2E3 257 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 PAPD4Q6PIY7 484 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 UTS2BQ765I0 119 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 APCDD1LQ8NCL9 501 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 C16orf52Q8NHV5 167 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 LCORQ96JN0 433 aaPredicted RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 NUDT9Q9BW91 350 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 HOXD1Q9GZZ0 328 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 OPN1SWP03999 348 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 PEPDP12955 493 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 CD247P20963 164 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 MRPS35P82673 323 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 PPP1R8Q12972 351 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 RIPK1Q13546 671 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 EXOSC7Q15024 291 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 RNASE12Q5GAN4 147 aaKnown RBP7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 DCST2Q5T1A1 773 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SATL1Q86VE3 508 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 C9orf40Q8IXQ3 194 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC35A4Q96G79 324 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 MPP4Q96JB8 637 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 CLPTM1LQ96KA5 538 aa7.78□□□□□ -1.16
PTPDC1-201ENST00000288976 C6orf62Q9GZU0 229 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms