RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 SCNM1Q9BWG6 230 aa10.44□□□□□ -0.74
XRCC4-201ENST00000282268 GALNT9Q9HCQ5 603 aa10.44□□□□□ -0.74
XRCC4-201ENST00000282268 KLRF1Q9NZS2 232 aa10.44□□□□□ -0.74
XRCC4-201ENST00000282268 SLC7A7Q9UM01 511 aa10.44□□□□□ -0.74
XRCC4-201ENST00000282268 SLC35A3Q9Y2D2 325 aa10.44□□□□□ -0.74
XRCC4-201ENST00000282268 ARGFXA6NJG6 315 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 NKX2-8O15522 239 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 ZNF264O43296 627 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 HCRTR2O43614 444 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 ADAM11O75078 769 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 DXOO77932 396 aaKnown RBP10.43□□□□□ -0.74
XRCC4-201ENST00000282268 SNAP29O95721 258 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 ANGPTL1O95841 491 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 NUDT14O95848 222 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 CAPNS1P04632 268 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 SERPINA7P05543 415 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 ELAVL4P26378 380 aaKnown RBP10.43□□□□□ -0.74
XRCC4-201ENST00000282268 ITPKBP27987 946 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 ACAA2P42765 397 aaKnown RBP10.43□□□□□ -0.74
XRCC4-201ENST00000282268 CLK3P49761 638 aaKnown RBP10.43□□□□□ -0.74
XRCC4-201ENST00000282268 SSR4P51571 173 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 MLF1P58340 268 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 SMIM11AP58511 58 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 SEC23BQ15437 767 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 MICAQ29983 383 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 DCST1Q5T197 706 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 IGF2-ASQ6U949 168 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 CBLN3Q6UW01 205 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 LYPD8Q6UX82 237 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 ZNF550Q7Z398 422 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 GDF7Q7Z4P5 450 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 ADAMTS17Q8TE56 1095 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 CYGBQ8WWM9 190 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 HGDQ93099 445 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 GTPBP3Q969Y2 492 aaKnown RBP10.43□□□□□ -0.74
XRCC4-201ENST00000282268 KLHDC3Q9BQ90 382 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 METTL7AQ9H8H3 244 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 TMEM27Q9HBJ8 222 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 RPS6KB2Q9UBS0 482 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 C15orf41Q9Y2V0 281 aa10.43□□□□□ -0.74
XRCC4-201ENST00000282268 FAM186AA6NE01 2351 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 A0A1W2PQ72 361 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 G3V3Y1 287 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 OR10H3O60404 316 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 FADS1O60427 444 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 CDC40O60508 579 aaKnown RBP eCLIP10.42□□□□□ -0.74
XRCC4-201ENST00000282268 THY1P04216 161 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 FBXO45P0C2W1 286 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 LINGO3P0C6S8 592 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 WT1P19544 449 aaPredicted RBP10.42□□□□□ -0.74
XRCC4-201ENST00000282268 LCN1P31025 176 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 TMED10P49755 219 aaKnown RBP10.42□□□□□ -0.74
XRCC4-201ENST00000282268 DAPP51397 102 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 ALDH3A2P51648 485 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 PSPHP78330 225 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 ZNF117Q03924 483 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 CLN3Q13286 438 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 TRAM2Q15035 370 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 TBC1D25Q3MII6 688 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 DCAF10Q5QP82 559 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 PRAMEF20Q5VT98 475 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 FNDC7Q5VTL7 733 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 AP1ARQ63HQ0 302 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 NUP54Q7Z3B4 507 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 NKAIN4Q8IVV8 208 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 CMIPQ8IY22 773 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 AQP11Q8NBQ7 271 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 PIK3C3Q8NEB9 887 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 DUSP19Q8WTR2 217 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 SPACA9Q96E40 222 aaPredicted RBP10.42□□□□□ -0.74
XRCC4-201ENST00000282268 FEVQ99581 238 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 RBM4BQ9BQ04 359 aaKnown RBP10.42□□□□□ -0.74
XRCC4-201ENST00000282268 ZNF559Q9BR84 538 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 RBM4Q9BWF3 364 aaKnown RBP10.42□□□□□ -0.74
XRCC4-201ENST00000282268 OSBPL10Q9BXB5 764 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 RIBC2Q9H4K1 309 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 MAN2C1Q9NTJ4 1040 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 TESQ9UGI8 421 aaKnown RBP10.42□□□□□ -0.74
XRCC4-201ENST00000282268 CNOT11Q9UKZ1 510 aaKnown RBP10.42□□□□□ -0.74
XRCC4-201ENST00000282268 YARS2Q9Y2Z4 477 aaKnown RBP10.42□□□□□ -0.74
XRCC4-201ENST00000282268 ORC6Q9Y5N6 252 aa10.42□□□□□ -0.74
XRCC4-201ENST00000282268 TRAPPC13A5PLN9 417 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 ALG1L2C9J202 215 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 KPNA4O00629 521 aaPredicted RBP10.41□□□□□ -0.74
XRCC4-201ENST00000282268 PIP5K1CO60331 668 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 DPM1O60762 260 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 OR5F1O95221 314 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 THRBP10828 461 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 IGFBP5P24593 272 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 IDH2P48735 452 aaKnown RBP10.41□□□□□ -0.74
XRCC4-201ENST00000282268 COPZ1P61923 177 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 LSM11P83369 360 aaKnown RBP eCLIP10.41□□□□□ -0.741e-11■■■■■ 50.1
XRCC4-201ENST00000282268 ST3GAL3Q11203 375 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 EPS8Q12929 822 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 KCNAB2Q13303 367 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 SKP2Q13309 424 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 ZNF468Q5VIY5 522 aaPredicted RBP10.41□□□□□ -0.74
XRCC4-201ENST00000282268 POMZP3Q6PJE2 187 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 OPN5Q6U736 354 aa10.41□□□□□ -0.74
XRCC4-201ENST00000282268 ZNF730Q6ZMV8 503 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms