RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 SLC38A1Q9H2H9 487 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 KCNIP2Q9NS61 270 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 PLEKHJ1Q9NW61 149 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 PTGDR2Q9Y5Y4 395 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 BCAS1O75363 584 aaPredicted RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 FGF18O76093 207 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SH3BP2P78314 561 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CCNJQ5T5M9 372 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 ZNF691Q5VV52 312 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CMIPQ8IY22 773 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 MRPL15Q9P015 296 aaKnown RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 RARRES3Q9UL19 164 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 ZNF860A6NHJ4 632 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 K7EPK0 472 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 PPP1R3DO95685 299 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 TAS2R30P59541 319 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 MFGE8Q08431 387 aaPredicted RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 ECH1Q13011 328 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 WBP2NLQ6ICG8 309 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 LANCL3Q6ZV70 420 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 FAM109AQ8N4B1 249 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 FAM71E2Q8N5Q1 922 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 OR5D16Q8NGK9 328 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 MSLNLQ96KJ4 702 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 MKRN2Q9H000 416 aaKnown RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SLC22A7Q9Y694 548 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CRYBG1Q9Y4K1 1723 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CHD3Q12873 2000 aaKnown RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 TCRBV3S1A0A5B6 114 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SERPINA5P05154 406 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 PRKACAP17612 351 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SLC2A5P22732 501 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 APLNRP35414 380 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 WDR5P61964 334 aaKnown RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CPOQ8IVL8 374 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 METTL27Q8N6F8 245 aaPredicted RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CWH43Q9H720 699 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CLDND1Q9NY35 253 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CBARPQ8N350 705 aaPredicted RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 OR4M1Q8NGD0 313 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SYNPRQ8TBG9 265 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SAMD8Q96LT4 415 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SOX17Q9H6I2 414 aaPredicted RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 C20orf202A1L168 122 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 MLLT11Q13015 90 aaPredicted RBP7.53□□□□□ -1.2
LIMD1-201ENST00000273317 B3GNT7Q8NFL0 401 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 OR51Q1Q8NH59 317 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 TMEM163Q8TC26 289 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 RBCK1Q9BYM8 510 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 XYLT2Q9H1B5 865 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 SYNPO2LQ9H987 977 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 ZNF160Q9HCG1 818 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 REV1Q9UBZ9 1251 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 ETV7Q9Y603 341 aa7.53□□□□□ -1.2
LIMD1-201ENST00000273317 CLDN24A6NM45 220 aa7.52□□□□□ -1.2
LIMD1-201ENST00000273317 HTR3BO95264 441 aa7.52□□□□□ -1.2
LIMD1-201ENST00000273317 LCKP06239 509 aa7.52□□□□□ -1.2
LIMD1-201ENST00000273317 ERVK-25P63136 954 aa7.52□□□□□ -1.2
LIMD1-201ENST00000273317 IGFN1Q86VF2 1251 aa7.52□□□□□ -1.2
LIMD1-201ENST00000273317 SLC43A2Q8N370 569 aa7.52□□□□□ -1.2
LIMD1-201ENST00000273317 NT5C3BQ969T7 300 aa7.52□□□□□ -1.2
LIMD1-201ENST00000273317 NECTIN4Q96NY8 510 aa7.52□□□□□ -1.2
LIMD1-201ENST00000273317 C8orf33Q9H7E9 229 aaPredicted RBP7.52□□□□□ -1.2
LIMD1-201ENST00000273317 NCOR1O75376 2440 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 CLDN10P78369 228 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 LRFN4Q6PJG9 635 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 Q6ZVL8 140 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 RABEPKQ7Z6M1 372 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 KLHDC8AQ8IYD2 350 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 F2RL3Q96RI0 385 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 C1QTNF2Q9BXJ5 285 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 CREBZFQ9NS37 354 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF223Q9UK11 482 aaPredicted RBP7.52□□□□□ -1.21
LIMD1-201ENST00000273317 MC3RP41968 323 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 RBMS2Q15434 407 aaKnown RBP7.52□□□□□ -1.21
LIMD1-201ENST00000273317 NADSYN1Q6IA69 706 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 OR5D14Q8NGL3 314 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 EMC7Q9NPA0 242 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 ANKMY1Q9P2S6 941 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 PCDHGA6Q9Y5G7 932 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 ENTPD2Q9Y5L3 495 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 UBFD1O14562 309 aaKnown RBP7.52□□□□□ -1.21
LIMD1-201ENST00000273317 SHC2P98077 582 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 NSDHLQ15738 373 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 NKPD1Q17RQ9 610 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 TTLL10Q6ZVT0 673 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF610Q8N9Z0 462 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 OR56B4Q8NH76 319 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 DHRS4Q9BTZ2 278 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 BTBD2Q9BX70 525 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 PLCH1Q4KWH8 1693 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 A0A087WUU8 490 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF840PA6NDX5 716 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 OR2T1O43869 369 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 GABRA5P31644 462 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 PRAMEF8Q5VWM4 474 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 PRAMEF7Q5VXH5 474 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 SFRP4Q6FHJ7 346 aaPredicted RBP7.52□□□□□ -1.21
LIMD1-201ENST00000273317 LMO3Q8TAP4 145 aa7.52□□□□□ -1.21
LIMD1-201ENST00000273317 CREB3L4Q8TEY5 395 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms