RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 FFAR1O14842 300 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 RGS5O15539 181 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 UTS2O95399 124 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 THBS1P07996 1170 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 SP9P0CG40 484 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 CKMT1AP12532 417 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 CD36P16671 472 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 PCYT1AP49585 367 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 GPR143P51810 404 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 RHBDD2Q6NTF9 364 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 C16orf87Q6PH81 154 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 ULK3Q6PHR2 472 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 DHRS4L2Q6PKH6 230 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 ZAR1Q86SH2 424 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 ENTHD1Q8IYW4 607 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 OR6K6Q8NGW6 343 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 SMPDL3BQ92485 455 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 TMCO6Q96DC7 493 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 WFDC6Q9BQY6 131 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 SAP130Q9H0E3 1048 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 ATP13A2Q9NQ11 1180 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 TESQ9UGI8 421 aaKnown RBP8.61□□□□□ -1.03
SSR3-201ENST00000265044 GTF2A1LQ9UNN4 478 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 SLC35A3Q9Y2D2 325 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 DTX4Q9Y2E6 619 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 PCDHGA6Q9Y5G7 932 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 ATG2AQ2TAZ0 1938 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 MUC22E2RYF6 1773 aaPredicted RBP8.61□□□□□ -1.03
SSR3-201ENST00000265044 SVILO95425 2214 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 TRAV27A0A087WT01 109 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 MCIDASD6RGH6 385 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 FLRT2O43155 660 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 ZNF264O43296 627 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 PIP5K1CO60331 668 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 HCN1O60741 890 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 INMTO95050 263 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 DBTP11182 482 aaKnown RBP8.61□□□□□ -1.03
SSR3-201ENST00000265044 TCN2P20062 427 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 HOXA6P31267 233 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 FOLR3P41439 243 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 PPICP45877 212 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 DCAF7P61962 342 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 C3orf38Q5JPI3 329 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 FCRLBQ6BAA4 426 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 FAHD1Q6P587 224 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 RAB11FIP2Q7L804 512 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 PRSS42Q7Z5A4 293 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 SPARTQ8N0X7 666 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 DUSP19Q8WTR2 217 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 FKBP10Q96AY3 582 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 ZHX1-C8orf76Q96EF9 292 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 GIMAP5Q96F15 307 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 ERMAPQ96PL5 475 aaPredicted RBP8.61□□□□□ -1.03
SSR3-201ENST00000265044 CHCHD6Q9BRQ6 235 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 NUDT9Q9BW91 350 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 DSN1Q9H410 356 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 NANSQ9NR45 359 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 PADI1Q9ULC6 663 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 VDAC3Q9Y277 283 aa8.61□□□□□ -1.03
SSR3-201ENST00000265044 CENPVL1A0A0U1RR11 272 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 FAM183AA6NL82 134 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 CLCA1A8K7I4 914 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 D6RAR5 112 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 PRR23D1E9PI22 279 aaPredicted RBP8.6□□□□□ -1.03
SSR3-201ENST00000265044 ENTPD6O75354 484 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 SMIM18P0DKX4 95 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 PRR23D2P0DMB1 279 aaPredicted RBP8.6□□□□□ -1.03
SSR3-201ENST00000265044 PGCP20142 388 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 CFHR1Q03591 330 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 RUNX1T1Q06455 604 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 FUT5Q11128 374 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 NANOGNBQ7Z5D8 188 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 ARHGAP22Q7Z5H3 698 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 BCDIN3DQ7Z5W3 292 aaKnown RBP8.6□□□□□ -1.03
SSR3-201ENST00000265044 IGFN1Q86VF2 1251 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 JAZF1Q86VZ6 243 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 ZNF440Q8IYI8 595 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 ZNF321PQ8N8H1 164 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 CYB561A3Q8NBI2 242 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 GALNT6Q8NCL4 622 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 OR10H4Q8NGA5 316 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 C12orf43Q96C57 262 aaKnown RBP8.6□□□□□ -1.03
SSR3-201ENST00000265044 OMA1Q96E52 524 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 SGTBQ96EQ0 304 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 LMF1Q96S06 567 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 NDRG4Q9ULP0 352 aaKnown RBP8.6□□□□□ -1.03
SSR3-201ENST00000265044 CDHR4A6H8M9 788 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 C11orf98E9PRG8 122 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 TOX3O15405 576 aaPredicted RBP8.6□□□□□ -1.03
SSR3-201ENST00000265044 ZFAND5O76080 213 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 LCKP06239 509 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 STAT5AP42229 794 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 LSM11P83369 360 aaKnown RBP eCLIP8.6□□□□□ -1.03
SSR3-201ENST00000265044 TSPAN31Q12999 210 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 ILKQ13418 452 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 KLHL22Q53GT1 634 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 C16orf47Q6ZP98 133 aaPredicted RBP8.6□□□□□ -1.03
SSR3-201ENST00000265044 QSOX2Q6ZRP7 698 aa8.6□□□□□ -1.03
SSR3-201ENST00000265044 SHFQ7M4L6 423 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms