RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 MED13LQ71F56 2210 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 GTPBP1O00178 669 aaKnown RBP14.44□□□□□ -0.1
USE1-201ENST00000263897 EIF1AYO14602 144 aaKnown RBP14.44□□□□□ -0.1
USE1-201ENST00000263897 ADAMDEC1O15204 470 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 OIP5O43482 229 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 SMNDC1O75940 238 aaKnown RBP eCLIP14.44□□□□□ -0.1
USE1-201ENST00000263897 AQP8O94778 261 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 CGAP01215 116 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 OPN1LWP04000 364 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 LINGO3P0C6S8 592 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 EIF1AXP47813 144 aaKnown RBP14.44□□□□□ -0.1
USE1-201ENST00000263897 PCYT1AP49585 367 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 RPS26P62854 115 aaKnown RBP14.44□□□□□ -0.1
USE1-201ENST00000263897 DPY19L1Q2PZI1 675 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 BEND6Q5SZJ8 279 aaPredicted RBP14.44□□□□□ -0.1
USE1-201ENST00000263897 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.44□□□□□ -0.1
USE1-201ENST00000263897 CBLN3Q6UW01 205 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 SPNS3Q6ZMD2 512 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 CDC20BQ86Y33 519 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 CHDHQ8NE62 594 aaPredicted RBP14.44□□□□□ -0.1
USE1-201ENST00000263897 OR4A15Q8NGL6 344 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 MIPOL1Q8TD10 442 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 ADGRG7Q96K78 797 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 RNF145Q96MT1 663 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 DACH2Q96NX9 599 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 LIME1Q9H400 295 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 PAQR5Q9NXK6 330 aaPredicted RBP14.44□□□□□ -0.1
USE1-201ENST00000263897 ICAM5Q9UMF0 924 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 CARD8Q9Y2G2 431 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 HEATR5AQ86XA9 2040 aa14.44□□□□□ -0.1
USE1-201ENST00000263897 RNF103-CHMP3A0A140T963 221 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 SDHDO14521 159 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 HDAC3O15379 428 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 EFNA2O43921 213 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 SNNO75324 88 aaPredicted RBP14.43□□□□□ -0.1
USE1-201ENST00000263897 CPSF4O95639 269 aaKnown RBP14.43□□□□□ -0.1
USE1-201ENST00000263897 FCGR2AP12318 317 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 UQCRC2P22695 453 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 EIF1P41567 113 aaKnown RBP14.43□□□□□ -0.1
USE1-201ENST00000263897 P2RX1P51575 399 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 CLNS1AP54105 237 aaKnown RBP14.43□□□□□ -0.1
USE1-201ENST00000263897 MAGOHP61326 146 aaKnown RBP14.43□□□□□ -0.1
USE1-201ENST00000263897 SIRPAP78324 504 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 FAM27E3Q08E93 113 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 FGFBP1Q14512 234 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 CASP8Q14790 479 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 GUSBP1Q15486 140 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 CTU2Q2VPK5 515 aaKnown RBP14.43□□□□□ -0.1
USE1-201ENST00000263897 ARHGAP11BQ3KRB8 267 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 SPANXN4Q5MJ08 99 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 ZNF474Q6S9Z5 364 aaPredicted RBP14.43□□□□□ -0.1
USE1-201ENST00000263897 ESPNLQ6ZVH7 1005 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 ANKRD46Q86W74 232 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 OR10D3Q8NH80 312 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 MGARPQ8TDB4 240 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 GPR119Q8TDV5 335 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 TLCD1Q96CP7 247 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 PRRG4Q9BZD6 226 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 NMUR2Q9GZQ4 415 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 TMBIM4Q9HC24 238 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 NDRG3Q9UGV2 375 aa14.43□□□□□ -0.1
USE1-201ENST00000263897 PRRC2AP48634 2157 aaKnown RBP14.43□□□□□ -0.1
USE1-201ENST00000263897 HRNRQ86YZ3 2850 aaPredicted RBP14.43□□□□□ -0.1
USE1-201ENST00000263897 ITPR3Q14573 2671 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 A0A0J9YW62 118 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 CXCL13O43927 109 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 EIF4E2O60573 245 aaKnown RBP14.42□□□□□ -0.1
USE1-201ENST00000263897 FCMRO60667 390 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 STX11O75558 287 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 GOSR1O95249 250 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 NUDT14O95848 222 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 AK1P00568 194 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 ALDOCP09972 364 aaKnown RBP14.42□□□□□ -0.1
USE1-201ENST00000263897 CD8BP10966 210 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 IL11P20809 199 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 ME2P23368 584 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 ADH6P28332 368 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 S100A3P33764 101 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 SLC6A8P48029 635 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 RNF144AP50876 292 aaPredicted RBP14.42□□□□□ -0.1
USE1-201ENST00000263897 IST1P53990 364 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 SUMO3P55854 103 aaPredicted RBP14.42□□□□□ -0.1
USE1-201ENST00000263897 UFM1P61960 85 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 GPR68Q15743 365 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 ZNF141Q15928 474 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 AP1ARQ63HQ0 302 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 ATG16L1Q676U5 607 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 FAM214BQ7L5A3 538 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 SPATA19Q7Z5L4 167 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 LILRA2Q8N149 483 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 ZNF610Q8N9Z0 462 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 OR2V1Q8NHB1 315 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 RAB3IL1Q8TBN0 382 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 OSTF1Q92882 214 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 SLC35G5Q96KT7 338 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 TEX37Q96LM6 180 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 OPN3Q9H1Y3 402 aaPredicted RBP14.42□□□□□ -0.1
USE1-201ENST00000263897 OR51I1Q9H343 314 aa14.42□□□□□ -0.1
USE1-201ENST00000263897 WDR55Q9H6Y2 383 aaPredicted RBP14.42□□□□□ -0.1
USE1-201ENST00000263897 MANSC1Q9H8J5 431 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms