RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 PLEKHB1Q9UF11 243 aaPredicted RBP13.27□□□□□ -0.28
SCARF1-201ENST00000263071 CLDN4O14493 209 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 AKR7A3O95154 331 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 TFP02787 698 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 SCG5P05408 212 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 SLC1A3P43003 542 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 SPINT3P49223 89 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 NANOGP1Q8N7R0 232 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 OR10K1Q8NGX5 313 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 OR5J2Q8NH18 312 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 OR1S1Q8NH92 325 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 ING5Q8WYH8 240 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 COL26A1Q96A83 441 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 PITX2Q99697 317 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 TSSK6Q9BXA6 273 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 SAP130Q9H0E3 1048 aa13.27□□□□□ -0.28
SCARF1-201ENST00000263071 ATG2BQ96BY7 2078 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 C2orf92A0A1B0GVN3 265 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 ARPC5O15511 151 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 SPDEFO95238 335 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 RECKO95980 971 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 HLA-DQB1P01920 261 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 CRISP1P54107 249 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 KRT33BQ14525 404 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 DCST1Q5T197 706 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 C22orf39Q6P5X5 142 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 CHST9Q7L1S5 443 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 RELL2Q8NC24 303 aaPredicted RBP13.27□□□□□ -0.29
SCARF1-201ENST00000263071 PXT1Q8NFP0 134 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 CNOT9Q92600 299 aaKnown RBP13.27□□□□□ -0.29
SCARF1-201ENST00000263071 RELTQ969Z4 430 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 F2RL3Q96RI0 385 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 WFDC6Q9BQY6 131 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 SPTBP11277 2137 aa13.27□□□□□ -0.29
SCARF1-201ENST00000263071 PPM1DO15297 605 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 SCN2BO60939 215 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 GCM2O75603 506 aaPredicted RBP13.26□□□□□ -0.29
SCARF1-201ENST00000263071 NR2F1P10589 423 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 ASMTP46597 345 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 METAP1P53582 386 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 FOXK2Q01167 660 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 CLINT1Q14677 625 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 RAET1GQ6H3X3 334 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 SMARCD3Q6STE5 483 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 RFT1Q96AA3 541 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 C14orf144Q96I85 54 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 PPP1R3EQ9H7J1 279 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 GPATCH2Q9NW75 528 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 DHCR7Q9UBM7 475 aaKnown RBP13.26□□□□□ -0.29
SCARF1-201ENST00000263071 SLC25A13Q9UJS0 675 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 CEP290O15078 2479 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 HYKKA2RU49 373 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 SGK494L7N484 410 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 ELFN1P0C7U0 828 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 HOXA6P31267 233 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 ETV5P41161 510 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 ELAVL2Q12926 359 aaKnown RBP13.26□□□□□ -0.29
SCARF1-201ENST00000263071 EIF4E3Q8N5X7 224 aaKnown RBP13.26□□□□□ -0.29
SCARF1-201ENST00000263071 TMEM185AQ8NFB2 350 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 KLK6Q92876 244 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 SLC6A16Q9GZN6 736 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 GABARAPL1Q9H0R8 117 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 SLC6A20Q9NP91 592 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 ENAMQ9NRM1 1142 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 TXNL4BQ9NX01 149 aaKnown RBP13.26□□□□□ -0.29
SCARF1-201ENST00000263071 OR10H1Q9Y4A9 318 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 PCDHGA5Q9Y5G8 931 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 PCDHGA1Q9Y5H4 931 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 F5P12259 2224 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 TDRD15B5MCY1 1934 aaKnown RBP13.26□□□□□ -0.29
SCARF1-201ENST00000263071 A0A1W2PPK0 400 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 MANSC4A6NHS7 340 aaPredicted RBP13.26□□□□□ -0.29
SCARF1-201ENST00000263071 TIA1P31483 386 aaKnown RBP eCLIP13.26□□□□□ -0.293e-6■■□□□ 11.6
SCARF1-201ENST00000263071 S100A11P31949 105 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 CRYBB2P43320 205 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 ZNF628Q5EBL2 1059 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 ANXA8L1Q5VT79 327 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 TCEAL6Q6IPX3 200 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 FAHD1Q6P587 224 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 TSEN54Q7Z6J9 526 aaKnown RBP13.26□□□□□ -0.29
SCARF1-201ENST00000263071 NPAS4Q8IUM7 802 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 SYNPOQ8N3V7 929 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 ZSCAN1Q8NBB4 408 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 LRR1Q96L50 414 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 CACNG6Q9BXT2 260 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 KLHL1Q9NR64 748 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 GSTK1Q9Y2Q3 226 aa13.26□□□□□ -0.29
SCARF1-201ENST00000263071 CACNA1IQ9P0X4 2223 aa13.25□□□□□ -0.29
SCARF1-201ENST00000263071 BTBD17A6NE02 478 aa13.25□□□□□ -0.29
SCARF1-201ENST00000263071 CASC3O15234 703 aaKnown RBP13.25□□□□□ -0.29
SCARF1-201ENST00000263071 LRG1P02750 347 aa13.25□□□□□ -0.29
SCARF1-201ENST00000263071 TCRBP04435 133 aa13.25□□□□□ -0.29
SCARF1-201ENST00000263071 CXCL2P19875 107 aa13.25□□□□□ -0.29
SCARF1-201ENST00000263071 PSMB5P28074 263 aa13.25□□□□□ -0.29
SCARF1-201ENST00000263071 AKR1C2P52895 323 aa13.25□□□□□ -0.29
SCARF1-201ENST00000263071 AKR1C1Q04828 323 aa13.25□□□□□ -0.29
SCARF1-201ENST00000263071 MZT2AQ6P582 158 aa13.25□□□□□ -0.29
SCARF1-201ENST00000263071 IL20RBQ6UXL0 311 aa13.25□□□□□ -0.29
SCARF1-201ENST00000263071 IQCHQ86VS3 1027 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms