RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ZNF704Q6ZNC4 412 aaPredicted RBP13.46□□□□□ -0.25
CUX2-201ENST00000261726 VWA5B2Q8N398 1253 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 RSPRY1Q96DX4 576 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 RANBP9Q96S59 729 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 CHRDQ9H2X0 955 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 SDHAF2Q9NX18 166 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 CD300AQ9UGN4 299 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 SLC6A5Q9Y345 797 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 ZNF840PA6NDX5 716 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 D6RAR5 112 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 LDB3O75112 727 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 ABOP16442 354 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 HOXA9P31269 272 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 SLC10A2Q12908 348 aaPredicted RBP13.46□□□□□ -0.25
CUX2-201ENST00000261726 METTL11BQ5VVY1 283 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 OR51D1Q8NGF3 324 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 KLHL42Q9P2K6 505 aa13.46□□□□□ -0.25
CUX2-201ENST00000261726 K7EPK0 472 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 RDH16O75452 317 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 SNRNP70P08621 437 aaKnown RBP13.46□□□□□ -0.26
CUX2-201ENST00000261726 UBL4AP11441 157 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 CSNK1A1P48729 337 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 SLC14A1Q13336 389 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 POU4F3Q15319 338 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 RGNQ15493 299 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 MANEALQ5VSG8 457 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 ABHD12BQ7Z5M8 362 aaPredicted RBP13.46□□□□□ -0.26
CUX2-201ENST00000261726 DCP2Q8IU60 420 aaKnown RBP13.46□□□□□ -0.26
CUX2-201ENST00000261726 LRRC18Q8N456 261 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 FAM71E2Q8N5Q1 922 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 ENDOVQ8N8Q3 282 aaKnown RBP13.46□□□□□ -0.26
CUX2-201ENST00000261726 KDM1BQ8NB78 822 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 PIGCQ92535 297 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 MACROD1Q9BQ69 325 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 SORBS1Q9BX66 1292 aaKnown RBP13.46□□□□□ -0.26
CUX2-201ENST00000261726 ENKD1Q9H0I2 346 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 A6NIN4 97 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 A6NIZ1 184 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 HSPB6O14558 160 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 HLCSP50747 726 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 RAP1BP61224 184 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 RAP1AP62834 184 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 SH3BP2P78314 561 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 CEACAM7Q14002 265 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 CNN3Q15417 329 aaKnown RBP13.46□□□□□ -0.26
CUX2-201ENST00000261726 CHST14Q8NCH0 376 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 ADAMTS19Q8TE59 1207 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 FOXJ1Q92949 421 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 SLC45A1Q9Y2W3 748 aa13.46□□□□□ -0.26
CUX2-201ENST00000261726 NUDT7P0C024 238 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 ARSDP51689 593 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 SLC10A1Q14973 349 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 OR13J1Q8NGT2 312 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 FAM3CQ92520 227 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 SUCNR1Q9BXA5 334 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 ACTL7AQ9Y615 435 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 CYB5BO43169 146 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 GLSO94925 669 aaPredicted RBP13.45□□□□□ -0.26
CUX2-201ENST00000261726 MT-ND4P03905 459 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 HNRNPA1P09651 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
CUX2-201ENST00000261726 ERVPABLB-1P60509 514 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 EEF1A2Q05639 463 aaKnown RBP13.45□□□□□ -0.26
CUX2-201ENST00000261726 ZNF585AQ6P3V2 769 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 UNC5DQ6UXZ4 953 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 BEST4Q8NFU0 473 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 GPR148Q8TDV2 347 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 TXN2Q99757 166 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 RIMS3Q9UJD0 308 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 H0Y8G0 127 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 OIP5O43482 229 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 DENRO43583 198 aaKnown RBP13.45□□□□□ -0.26
CUX2-201ENST00000261726 ADAMTS4O75173 837 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 GYPBP06028 91 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 CSF1P09603 554 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 PXNP49023 591 aaPredicted RBP13.45□□□□□ -0.26
CUX2-201ENST00000261726 BEX5Q5H9J7 111 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 OR5M10Q6IEU7 315 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 EGFL6Q8IUX8 553 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 SULF2Q8IWU5 870 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 ZFP82Q8N141 532 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 RTP3Q9BQQ7 232 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 PAAF1Q9BRP4 392 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 THSD1Q9NS62 852 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 ZNF217O75362 1048 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 KITLGP21583 273 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 NADSYN1Q6IA69 706 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 TMEM25Q86YD3 366 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 TRUB1Q8WWH5 349 aaKnown RBP13.45□□□□□ -0.26
CUX2-201ENST00000261726 OR6C2Q9NZP2 312 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 MEGF11A6BM72 1044 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 MGST1P10620 155 aaKnown RBP13.45□□□□□ -0.26
CUX2-201ENST00000261726 HLA-DMAP28067 261 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 WNT4P56705 351 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 MC2RQ01718 297 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 GTDC1Q4AE62 458 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 LIPIQ6XZB0 460 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 PRSS48Q7RTY5 328 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 PLEKHO2Q8TD55 490 aa13.45□□□□□ -0.26
CUX2-201ENST00000261726 C8orf33Q9H7E9 229 aaPredicted RBP13.45□□□□□ -0.26
CUX2-201ENST00000261726 TMEM59LQ9UK28 342 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms