RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SLC29A4Q7RTT9 530 aa20.58■□□□□ 0.89
SIX3-201ENST00000260653 GATSQ8NAP1 163 aa20.58■□□□□ 0.89
SIX3-201ENST00000260653 ZNF540Q8NDQ6 660 aa20.58■□□□□ 0.89
SIX3-201ENST00000260653 TOR1AIP2Q8NFQ8 470 aa20.58■□□□□ 0.89
SIX3-201ENST00000260653 NODALQ96S42 347 aa20.58■□□□□ 0.89
SIX3-201ENST00000260653 PLA2G12AQ9BZM1 189 aa20.58■□□□□ 0.89
SIX3-201ENST00000260653 EGLN3Q9H6Z9 239 aa20.58■□□□□ 0.89
SIX3-201ENST00000260653 TPRKBQ9Y3C4 175 aa20.58■□□□□ 0.89
SIX3-201ENST00000260653 GSTM3P21266 225 aa20.58■□□□□ 0.88
SIX3-201ENST00000260653 MC2RQ01718 297 aa20.58■□□□□ 0.88
SIX3-201ENST00000260653 TSPAN31Q12999 210 aa20.58■□□□□ 0.88
SIX3-201ENST00000260653 KLHL26Q53HC5 615 aa20.58■□□□□ 0.88
SIX3-201ENST00000260653 XAF1Q6GPH4 301 aa20.58■□□□□ 0.88
SIX3-201ENST00000260653 FAM199XQ6PEV8 388 aaPredicted RBP20.58■□□□□ 0.88
SIX3-201ENST00000260653 ADOQ96SZ5 270 aa20.58■□□□□ 0.88
SIX3-201ENST00000260653 CCDC90BQ9GZT6 254 aa20.58■□□□□ 0.88
SIX3-201ENST00000260653 DUSP21Q9H596 190 aa20.58■□□□□ 0.88
SIX3-201ENST00000260653 AMBNQ9NP70 447 aa20.58■□□□□ 0.88
SIX3-201ENST00000260653 ERVK-18Q9QC07 812 aa20.58■□□□□ 0.88
SIX3-201ENST00000260653 CCDC160A6NGH7 325 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 H3BSA7 217 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 EMP2P54851 167 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 DCAF7P61962 342 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 FAM69BQ5VUD6 431 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 CMIPQ8IY22 773 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 METTL21AQ8WXB1 218 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 LIN28AQ9H9Z2 209 aaKnown RBP20.57■□□□□ 0.88
SIX3-201ENST00000260653 TMEM27Q9HBJ8 222 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 UBQLN4Q9NRR5 601 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 A0A1B0GWA3 101 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 SYNDIG1LA6NDD5 238 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 UTS2O95399 124 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 SLC5A2P31639 672 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 NUDT6P53370 316 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 ZNF613Q6PF04 617 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 CRB3Q9BUF7 120 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 YIPF3Q9GZM5 350 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 SLC26A1Q9H2B4 701 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 EVA1AQ9H8M9 152 aa20.57■□□□□ 0.88
SIX3-201ENST00000260653 ZNF223Q9UK11 482 aaPredicted RBP20.57■□□□□ 0.88
SIX3-201ENST00000260653 A0A0B4J2E0 115 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 A0A1B0GX12 115 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 ITIH1P19827 911 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 CD226Q15762 336 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 C12orf73Q69YU5 71 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 MRPL14Q6P1L8 145 aaKnown RBP20.56■□□□□ 0.88
SIX3-201ENST00000260653 APOOLQ6UXV4 268 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 PTCHD4Q6ZW05 846 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 GPR141Q7Z602 305 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 POGLUT1Q8NBL1 392 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 APCDD1LQ8NCL9 501 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 PFN4Q8NHR9 129 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 C17orf50Q8WW18 174 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 FBXO8Q9NRD0 319 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 CEPT1Q9Y6K0 416 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 SAGE2PA6NJ88 616 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 OR6C76A6NM76 312 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 KLF4O43474 513 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 REM1O75628 298 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 HPGDP15428 266 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 FPR3P25089 353 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 RAB39AQ14964 217 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 CNPY1Q3B7I2 92 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 AHSA2Q719I0 299 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 NAXDQ8IW45 347 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 ZNF441Q8N8Z8 693 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 TMEM239Q8WW34 195 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 DGCR14Q96DF8 476 aaKnown RBP20.56■□□□□ 0.88
SIX3-201ENST00000260653 IL4I1Q96RQ9 567 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 ULBP3Q9BZM4 244 aa20.56■□□□□ 0.88
SIX3-201ENST00000260653 TEX51A0A1B0GUA7 166 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 KPNA4O00629 521 aaPredicted RBP20.55■□□□□ 0.88
SIX3-201ENST00000260653 BORAQ6PGQ7 559 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 ZNF550Q7Z398 422 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 ZNF527Q8NB42 609 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 NFAM1Q8NET5 270 aaPredicted RBP20.55■□□□□ 0.88
SIX3-201ENST00000260653 B3GNT7Q8NFL0 401 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 OR8D4Q8NGM9 314 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 C8orf44Q96CB5 159 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 MRTO4Q9UKD2 239 aaKnown RBP20.55■□□□□ 0.88
SIX3-201ENST00000260653 SNX5Q9Y5X3 404 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 CDC42EP2O14613 210 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 ICOSLGO75144 302 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 ZNF806P0C7X5 589 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 CCKBRP32239 447 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 GINS1Q14691 196 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 ZSWIM7Q19AV6 140 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 FNDC7Q5VTL7 733 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 PAPD4Q6PIY7 484 aaKnown RBP20.55■□□□□ 0.88
SIX3-201ENST00000260653 SLCO6A1Q86UG4 719 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 CADM2Q8N3J6 435 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 SLC35B4Q969S0 331 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 WDR77Q9BQA1 342 aaPredicted RBP20.55■□□□□ 0.88
SIX3-201ENST00000260653 TRIM2Q9C040 744 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 HOXD1Q9GZZ0 328 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 VCX3AQ9NNX9 186 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 C20orf141Q9NUB4 165 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 SLC39A1Q9NY26 324 aa20.55■□□□□ 0.88
SIX3-201ENST00000260653 SCDO00767 359 aa20.54■□□□□ 0.88
SIX3-201ENST00000260653 TO15178 435 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms