RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 Q9Y3F1 56 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ARNTLO00327 626 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 SLC43A1O75387 559 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 RIDAP52758 137 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 CYCSP99999 105 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 RAB40BQ12829 278 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 NOGQ13253 232 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 GAB1Q13480 694 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 EIF2B1Q14232 305 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ELOAQ14241 798 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 TANGO2Q6ICL3 276 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 C12orf40Q86WS4 652 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 METTL27Q8N6F8 245 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 OR6N1Q8NGY5 312 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 SLC39A13Q96H72 371 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 UHRF1Q96T88 793 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ARPC5LQ9BPX5 153 aa9.19□□□□□ -0.94
CTDSPL2-201ENST00000260327 ACY1Q03154 408 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 ARSJQ5FYB0 599 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 DCST2Q5T1A1 773 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 FRMPD2BQ6IN97 320 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 SDR9C7Q8NEX9 313 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 OR56B4Q8NH76 319 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 TCRBP04435 133 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 CLDN12P56749 244 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 ZC3H14Q6PJT7 736 aaKnown RBP9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 TRAM1L1Q8N609 369 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 TMEM175Q9BSA9 504 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 ACKR4Q9NPB9 350 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 LTB4R2Q9NPC1 389 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 ZDHHC4Q9NPG8 344 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 KLHL21Q9UJP4 597 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 NAALAD2Q9Y3Q0 740 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 PRSS21Q9Y6M0 314 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 HMGB3O15347 200 aaKnown RBP9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 RAB3AP20336 220 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 EPHA1P21709 976 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 NME2P22392 152 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 SERPINF1P36955 418 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 WDR5P61964 334 aaKnown RBP9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 TSSK4Q6SA08 328 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 SERPINA11Q86U17 422 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 NLRP8Q86W28 1048 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 NRROSQ86YC3 692 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 LACC1Q8IV20 430 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 NANPQ8TBE9 248 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 SLC12A9Q9BXP2 914 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 NKX6-2Q9C056 277 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 GABRR3A8MPY1 467 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 LGALS8O00214 317 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 SPINT3P49223 89 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 CLRN1P58418 232 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 ZNF805Q5CZA5 627 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 RTP2Q5QGT7 225 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 FCRLAQ7L513 359 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 FUNDC1Q8IVP5 155 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 OR7G3Q8NG95 312 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 OR52H1Q8NGJ2 320 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 MOAP1Q96BY2 351 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 C20orf24Q9BUV8 137 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 SERINC1Q9NRX5 453 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 GON4LQ3T8J9 2241 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 PRRC2BQ5JSZ5 2229 aaKnown RBP9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 GDNFP39905 211 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 GP2P55259 537 aaKnown RBP9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 PKDCCQ504Y2 493 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 C3orf33Q6P1S2 294 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 GRASPQ7Z6J2 395 aaPredicted RBP9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 SPNS2Q8IVW8 549 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 CHCHD4Q8N4Q1 142 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 NUDT8Q8WV74 236 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 BORCS8Q96FH0 119 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 RBP7Q96R05 134 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 DPYSL5Q9BPU6 564 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 NTMT1Q9BV86 223 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 IL17CQ9P0M4 197 aa9.18□□□□□ -0.94
CTDSPL2-201ENST00000260327 EDDM13A0A1B0GTR0 161 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 MYADML2A6NDP7 307 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 B4DGG1 531 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 TO15178 435 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 SPNP16150 400 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 CDK2P24941 298 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 CXADRP78310 365 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 AMZ1Q400G9 498 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 YIF1BQ5BJH7 314 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 KCTD11Q693B1 232 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 SIAH3Q8IW03 269 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 TMEM174Q8WUU8 243 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 TEX37Q96LM6 180 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 SEC22CQ9BRL7 303 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 CLMPQ9H6B4 373 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 FBXL12Q9NXK8 326 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 DOT1LQ8TEK3 1739 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 CSO75390 466 aaKnown RBP9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 TPPPO94811 219 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 GASTP01350 101 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 HOXB5P09067 269 aa9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 POLR2CP19387 275 aaPredicted RBP9.17□□□□□ -0.94
CTDSPL2-201ENST00000260327 CD70P32970 193 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms