RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 DLK2Q6UY11 383 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 MRPL21Q7Z2W9 205 aaKnown RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 TMEM144Q7Z5S9 345 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 MRPL52Q86TS9 123 aaKnown RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 PHACTR4Q8IZ21 702 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 JAGN1Q8N5M9 183 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 C11orf42Q8N5U0 333 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 PXT1Q8NFP0 134 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 OR5L2Q8NGL0 311 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 FAM110BQ8TC76 370 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 GNPDA2Q8TDQ7 276 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 NINJ1Q92982 152 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 NSUN4Q96CB9 384 aaKnown RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 MVB12AQ96EY5 273 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 C14orf79Q96F83 325 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 CMKLR1Q99788 373 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 PYM1Q9BRP8 204 aaKnown RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 RUSC1Q9BVN2 902 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 VCX2Q9H322 139 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 RHOFQ9HBH0 211 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 CHRAC1Q9NRG0 131 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 STOX2Q9P2F5 926 aaPredicted RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF346Q9UL40 294 aaKnown RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 ICKQ9UPZ9 632 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 ALG6Q9Y672 507 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 OAS3Q9Y6K5 1087 aaKnown RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 TRAV26-1A0A087WT03 109 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 C17orf105B2RV13 164 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 C1QTNF3-AMACRE9PGA6 284 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 TPST1O60507 370 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 PQBP1O60828 265 aaKnown RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 PTCD1O75127 700 aaKnown RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 SAP30O75446 220 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 TGFAP01135 160 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 INHAP05111 366 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 CD5P06127 495 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 BCHEP06276 602 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 ITGA5P08648 1049 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 ETS1P14921 441 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 DRD5P21918 477 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 GJA4P35212 333 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 BDH1Q02338 343 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 SLC10A2Q12908 348 aaPredicted RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 SF3A2Q15428 464 aaKnown RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 SIX1Q15475 284 aaPredicted RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 MESTQ5EB52 335 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 SH3PXD2AQ5TCZ1 1133 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 PID1Q7Z2X4 250 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF571Q7Z3V5 609 aaPredicted RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 MAVSQ7Z434 540 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 NAXDQ8IW45 347 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 BOD1L2Q8IYS8 172 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 DAW1Q8N136 415 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 RTL3Q8N8U3 475 aaKnown RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 OR5M9Q8NGP3 310 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 HLA-CQ95604 372 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 UCN3Q969E3 161 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 TOMM40LQ969M1 308 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 MRGPRX2Q96LB1 330 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 AGPAT1Q99943 283 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 SLITRK2Q9H156 845 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 SMCO4Q9NRQ5 59 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 PLEK2Q9NYT0 353 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 CARHSP1Q9Y2V2 147 aaKnown RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 PRG3Q9Y2Y8 225 aaPredicted RBP7.24□□□□□ -1.25
GPNMB-201ENST00000258733 KLF18A0A0U1RQI7 1052 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 C2orf78A6NCI8 922 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 UBDO15205 165 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 ECI2O75521 394 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 EFEMP2O95967 443 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 SFTPBP07988 381 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 FAM157BP0CG42 384 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 C1GALT1C1LP0DN25 315 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 HOXB2P14652 356 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 UCHL3P15374 230 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 ABOP16442 354 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 NNMTP40261 264 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 CTSKP43235 329 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 EPHA4P54764 986 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 WNT4P56705 351 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 BTG1P62324 171 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 IRF8Q02556 426 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 PTP4A2Q12974 167 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 RPE65Q16518 533 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 DECR1Q16698 335 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 CTU2Q2VPK5 515 aaKnown RBP7.23□□□□□ -1.25
GPNMB-201ENST00000258733 IZUMO3Q5VZ72 239 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 TRIQKQ629K1 86 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 KIRREL2Q6UWL6 708 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 KCTD1Q719H9 257 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 CMTR2Q8IYT2 770 aaKnown RBP7.23□□□□□ -1.25
GPNMB-201ENST00000258733 TNS4Q8IZW8 715 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 ST6GALNAC3Q8NDV1 305 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 SEMA3CQ99985 751 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 SLC35A5Q9BS91 424 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 FAAP24Q9BTP7 215 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 TBL1XR1Q9BZK7 514 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 ULBP1Q9BZM6 244 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 TKTL2Q9H0I9 626 aa7.23□□□□□ -1.25
GPNMB-201ENST00000258733 C20orf85Q9H1P6 137 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms