RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 SLC7A13Q8TCU3 470 aa11.14□□□□□ -0.63
NIP7-201ENST00000254940 ZNF764Q96H86 408 aaPredicted RBP11.14□□□□□ -0.63
NIP7-201ENST00000254940 ALPK1Q96QP1 1244 aa11.14□□□□□ -0.63
NIP7-201ENST00000254940 TSC22D3Q99576 134 aa11.14□□□□□ -0.63
NIP7-201ENST00000254940 DEFB126Q9BYW3 111 aa11.14□□□□□ -0.63
NIP7-201ENST00000254940 GABARAPL1Q9H0R8 117 aa11.14□□□□□ -0.63
NIP7-201ENST00000254940 CDCP1Q9H5V8 836 aa11.14□□□□□ -0.63
NIP7-201ENST00000254940 PLA2G3Q9NZ20 509 aa11.14□□□□□ -0.63
NIP7-201ENST00000254940 FLRT3Q9NZU0 649 aa11.14□□□□□ -0.63
NIP7-201ENST00000254940 PCDHGA6Q9Y5G7 932 aa11.14□□□□□ -0.63
NIP7-201ENST00000254940 GPC6Q9Y625 555 aaPredicted RBP11.14□□□□□ -0.63
NIP7-201ENST00000254940 USP24Q9UPU5 2620 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 EPG5Q9HCE0 2579 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 C2orf92A0A1B0GVN3 265 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 TRIM64A6NGJ6 449 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 SLC1A7O00341 560 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 SLC16A6O15403 523 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 AHCYL1O43865 530 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 ALDH3B2P48448 385 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 NUDT6P53370 316 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 CRISP3P54108 245 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 ZBTB46Q86UZ6 589 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 SAMD14Q8IZD0 417 aaPredicted RBP11.13□□□□□ -0.63
NIP7-201ENST00000254940 SNIP1Q8TAD8 396 aaKnown RBP11.13□□□□□ -0.63
NIP7-201ENST00000254940 ZNF354BQ96LW1 612 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 MS4A4EQ96PG1 132 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 FAM192AQ9GZU8 254 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 WWTR1Q9GZV5 400 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 NDRG4Q9ULP0 352 aaKnown RBP11.13□□□□□ -0.63
NIP7-201ENST00000254940 OR10H1Q9Y4A9 318 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 MED12Q93074 2177 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 C2orf72A6NCS6 295 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 TMEM200CA6NKL6 621 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 RRP8O43159 456 aaKnown RBP11.13□□□□□ -0.63
NIP7-201ENST00000254940 PLOD3O60568 738 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 IFNA14P01570 189 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 LIMS1P48059 325 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 KHKP50053 298 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 PSG6Q00889 435 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 RAB39AQ14964 217 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 EBPQ15125 230 aaKnown RBP11.13□□□□□ -0.63
NIP7-201ENST00000254940 GPR68Q15743 365 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 NPTX1Q15818 432 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 ZNF468Q5VIY5 522 aaPredicted RBP11.13□□□□□ -0.63
NIP7-201ENST00000254940 HLA-DQA1Q5Y7H0 255 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 XAF1Q6GPH4 301 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 CCDC103Q8IW40 242 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 ENTHD1Q8IYW4 607 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 NATD1Q8N6N6 113 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 ZNF675Q8TD23 568 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 ADAMTS15Q8TE58 950 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 APH1BQ8WW43 257 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 SLC39A7Q92504 469 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 DGCR14Q96DF8 476 aaKnown RBP11.13□□□□□ -0.63
NIP7-201ENST00000254940 ZNF607Q96SK3 696 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 GPA33Q99795 319 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 DGCR6LQ9BY27 220 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 A4GNTQ9UNA3 340 aa11.13□□□□□ -0.63
NIP7-201ENST00000254940 A0A087WXM4 84 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 A8MVJ9 347 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 PRAMEF2O60811 474 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 WBP4O75554 376 aaKnown RBP11.12□□□□□ -0.63
NIP7-201ENST00000254940 ANGPTL1O95841 491 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 IGKV1D-16P01601 117 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 RHCEP18577 417 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 TRHRP34981 398 aaPredicted RBP11.12□□□□□ -0.63
NIP7-201ENST00000254940 MAP2K4P45985 399 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 HLCSP50747 726 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 GPR107Q5VW38 600 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 BICRALQ6AI39 1079 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 C16orf62Q7Z3J2 963 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 CLVS1Q8IUQ0 354 aaPredicted RBP11.12□□□□□ -0.63
NIP7-201ENST00000254940 TAGAPQ8N103 731 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 MORN4Q8NDC4 146 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 EXTL1Q92935 676 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 VMP1Q96GC9 406 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 VSTM2LQ96N03 204 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 SELENONQ9NZV5 590 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 ERVK-18Q9QC07 812 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 PCNX3Q9H6A9 2034 aa11.12□□□□□ -0.63
NIP7-201ENST00000254940 TMEM247A6NEH6 219 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 ZNF891A8MT65 544 aaPredicted RBP11.11□□□□□ -0.63
NIP7-201ENST00000254940 HPP00738 406 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 CT45A8P0DMV1 189 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 CT45A9P0DMV2 189 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 DDX5P17844 614 aaKnown RBP11.11□□□□□ -0.63
NIP7-201ENST00000254940 ELAVL4P26378 380 aaKnown RBP11.11□□□□□ -0.63
NIP7-201ENST00000254940 PLAURQ03405 335 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 KCNC4Q03721 635 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 CT45A2Q5DJT8 189 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 ZNF311Q5JNZ3 666 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 SLC29A4Q7RTT9 530 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 BCDIN3DQ7Z5W3 292 aaKnown RBP11.11□□□□□ -0.63
NIP7-201ENST00000254940 COX18Q8N8Q8 333 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 GATSQ8NAP1 163 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 ZSCAN1Q8NBB4 408 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 OR56A1Q8NGH5 318 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 FAM81AQ8TBF8 368 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 RELTQ969Z4 430 aa11.11□□□□□ -0.63
NIP7-201ENST00000254940 RDH12Q96NR8 316 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms