RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 LOC285095A0A1B0GVY8 99 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 GJE1A6NN92 205 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 EFCAB7A8K855 629 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 CNIH2Q6PI25 160 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 PGBD5Q8N414 524 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 MS4A15Q8N5U1 240 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 MYO18AQ92614 2054 aaKnown RBP17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 AOAHP28039 575 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 HBA1P69905 142 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 CHDHQ8NE62 594 aaPredicted RBP17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 NRG4Q8WWG1 115 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 SENP5Q96HI0 755 aaPredicted RBP17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 EGLN3Q9H6Z9 239 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 MED20Q9H944 212 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 PRICKLE3O43900 615 aaPredicted RBP17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 TPPPO94811 219 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 BMP2P12643 396 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 COQ5Q5HYK3 327 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 SLC16A9Q7RTY1 509 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 ENTPD2Q9Y5L3 495 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 PHYHO14832 338 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 NCR1O76036 304 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 PTPN6P29350 595 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 GABARAPL2P60520 117 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 TANKQ92844 425 aa17.54■□□□□ 0.4
SMARCC1-201ENST00000254480 CAV2P51636 162 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 VASNQ6EMK4 673 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 LCN10Q6JVE6 187 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 CGB2Q6NT52 195 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 ABHD12BQ7Z5M8 362 aaPredicted RBP17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 TMEM150AQ86TG1 271 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 PAPD5Q8NDF8 572 aaKnown RBP17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 ULBP3Q9BZM4 244 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 PRDM9Q9NQV7 894 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 ATXN1LP0C7T5 689 aaKnown RBP17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 ABOP16442 354 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 HIST1H1TP22492 207 aaPredicted RBP17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 MAGEA6P43360 314 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 RPE65Q16518 533 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 LTC4SQ16873 150 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 SLC22A6Q4U2R8 563 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 TMEM201Q5SNT2 666 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 AADACL4Q5VUY2 407 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 B3GNT9Q6UX72 402 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 CPXM2Q8N436 756 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 CBLCQ9ULV8 474 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 POLHQ9Y253 713 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 GPR45Q9Y5Y3 372 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 UGDHO60701 494 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 ALDOCP09972 364 aaKnown RBP17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 PABPC4LP0CB38 370 aaKnown RBP17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 SPOCK1Q08629 439 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 CPZQ66K79 652 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 ASCC1Q8N9N2 400 aaKnown RBP17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 IL17RDQ8NFM7 739 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 OR4F15Q8NGB8 312 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 CTRCQ99895 268 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 DNAJB11Q9UBS4 358 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 ZNF443Q9Y2A4 671 aaPredicted RBP17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 LOC102723532A0A0G2JNH3 316 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 OPRL1P41146 370 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 CAV3P56539 151 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 ANKRD13BQ86YJ7 626 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 TM7SF3Q9NS93 570 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 UBFD1O14562 309 aaKnown RBP17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 OR8U9P0C7N5 309 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 GPR50Q13585 617 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 CST9Q5W186 159 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 ELP2Q6IA86 826 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 DCP2Q8IU60 420 aaKnown RBP17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 OR2A12Q8NGT7 310 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 SLC2A12Q8TD20 617 aa17.53■□□□□ 0.4
SMARCC1-201ENST00000254480 H0YGG7 62 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 C7P10643 843 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 SEC61A1P61619 476 aaKnown RBP17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 LTB4RQ15722 352 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 SLC5A12Q1EHB4 618 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 RAB41Q5JT25 222 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 C16orf58Q96GQ5 468 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 ZNF845Q96IR2 970 aaPredicted RBP17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 C20orf27Q9GZN8 174 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 ACOT13Q9NPJ3 140 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 SPDEFO95238 335 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 B3GALT4O96024 378 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 RETP07949 1114 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 PSPHP78330 225 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 OLIG3Q7RTU3 272 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 LILRB2Q8N423 598 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 LILRA3Q8N6C8 439 aaPredicted RBP17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 SYNPRQ8TBG9 265 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 SFXN5Q8TD22 340 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 SDSLQ96GA7 329 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 NELFAQ9H3P2 528 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 B3GNT2Q9NY97 397 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 NWD2Q9ULI1 1742 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 A0A0U1RQK1 487 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 EIF3FO00303 357 aaPredicted RBP17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 DCNP07585 359 aaKnown RBP17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 DHRS4L1P0CG22 281 aa17.52■□□□□ 0.4
SMARCC1-201ENST00000254480 GCH1P30793 250 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms