RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ICAM5Q9UMF0 924 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 VDAC3Q9Y277 283 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 WDR45Q9Y484 360 aa11.54□□□□□ -0.56
VPREB3-201ENST00000248948 ABCA12Q86UK0 2595 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 NPIPA5A0A0B4J1W7 369 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 NKX2-6A6NCS4 301 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 SERINC4A6NH21 518 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 CYSRT1A8MQ03 144 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 KDM4EB2RXH2 506 aaPredicted RBP11.53□□□□□ -0.56
VPREB3-201ENST00000248948 NPIPA7E9PJI5 369 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 H3BML4 177 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 C19orf84I3L1E1 186 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 HMGN4O00479 90 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF264O43296 627 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 EIF4E2O60573 245 aaKnown RBP11.53□□□□□ -0.56
VPREB3-201ENST00000248948 UGT2B17O75795 530 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 ANP32DO95626 131 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 IL18BPO95998 194 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 NPIPA8P0DM63 369 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 OR12D1P0DN82 309 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 STARP49675 285 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 ASCL1P50553 236 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF136P52737 540 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 SQLEQ14534 574 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 GPR68Q15743 365 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 FBXL19-AS1Q494R0 122 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 HSP90B2PQ58FF3 399 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 PDZK1Q5T2W1 519 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 TYW3Q6IPR3 259 aaKnown RBP11.53□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF621Q6ZSS3 439 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 GRAMD2AQ8IUY3 354 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF619Q8N2I2 560 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 METTL25Q8N6Q8 603 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF614Q8N883 585 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 RELL2Q8NC24 303 aaPredicted RBP11.53□□□□□ -0.56
VPREB3-201ENST00000248948 FAM71CQ8NEG0 241 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 ZFP90Q8TF47 636 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 RAB8BQ92930 207 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 ARSGQ96EG1 525 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 SH3YL1Q96HL8 342 aaPredicted RBP11.53□□□□□ -0.56
VPREB3-201ENST00000248948 SFXN3Q9BWM7 321 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 SLC24A3Q9HC58 644 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 NPDC1Q9NQX5 325 aaPredicted RBP11.53□□□□□ -0.56
VPREB3-201ENST00000248948 L3MBTL1Q9Y468 752 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 ZNF175Q9Y473 711 aa11.53□□□□□ -0.56
VPREB3-201ENST00000248948 ETV2O00321 342 aaPredicted RBP11.52□□□□□ -0.57
VPREB3-201ENST00000248948 GMFGO60234 142 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 FCMRO60667 390 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 RCBTB2O95199 551 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 LINGO3P0C6S8 592 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 TMIGD3P0DMS9 266 aaPredicted RBP11.52□□□□□ -0.57
VPREB3-201ENST00000248948 FCGR2AP12318 317 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 PSMA4P25789 261 aaKnown RBP11.52□□□□□ -0.57
VPREB3-201ENST00000248948 ADH6P28332 368 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 OPRM1P35372 400 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 PEX19P40855 299 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 RPS3AP61247 264 aaKnown RBP11.52□□□□□ -0.57
VPREB3-201ENST00000248948 EEF1A1P68104 462 aaKnown RBP11.52□□□□□ -0.57
VPREB3-201ENST00000248948 SRYQ05066 204 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 SKP2Q13309 424 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 CBFBQ13951 182 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 FGFBP1Q14512 234 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 C6orf10Q5SRN2 563 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 EEF1A1P5Q5VTE0 462 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 OR2A2Q6IF42 318 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 BLOC1S3Q6QNY0 202 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 CBLN3Q6UW01 205 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 FRRS1Q6ZNA5 592 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 CHMP1BQ7LBR1 199 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 GDF7Q7Z4P5 450 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 GGNQ86UU5 652 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 UBQLNLQ8IYU4 475 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 C9orf106Q8NAJ2 232 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 XAGE5Q8WWM1 108 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 PMM1Q92871 262 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 VPS33AQ96AX1 596 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 LRRC46Q96FV0 321 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 RNF145Q96MT1 663 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 TRNT1Q96Q11 434 aaKnown RBP11.52□□□□□ -0.57
VPREB3-201ENST00000248948 RABEP2Q9H5N1 569 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 THUMPD1Q9NXG2 353 aaKnown RBP11.52□□□□□ -0.57
VPREB3-201ENST00000248948 PAQR5Q9NXK6 330 aaPredicted RBP11.52□□□□□ -0.57
VPREB3-201ENST00000248948 P2RX2Q9UBL9 471 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 FOXD3Q9UJU5 478 aaPredicted RBP11.52□□□□□ -0.57
VPREB3-201ENST00000248948 TRIM33Q9UPN9 1127 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 SLC35A3Q9Y2D2 325 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 CARD8Q9Y2G2 431 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 ZNF337Q9Y3M9 751 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 GPC6Q9Y625 555 aaPredicted RBP11.52□□□□□ -0.57
VPREB3-201ENST00000248948 APCP25054 2843 aa11.52□□□□□ -0.57
VPREB3-201ENST00000248948 TEX15Q9BXT5 2789 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 UQCRHLA0A096LP55 91 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 CENPVL1A0A0U1RR11 272 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 SLC22A20A6NK97 555 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 GTPBP1O00178 669 aaKnown RBP11.51□□□□□ -0.57
VPREB3-201ENST00000248948 NR5A2O00482 541 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 SEC14L5O43304 696 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 DNAJA2O60884 412 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 H6PDO95479 791 aa11.51□□□□□ -0.57
VPREB3-201ENST00000248948 GSNP06396 782 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms