RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 OAFQ86UD1 273 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 MMP21Q8N119 569 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 OSTF1Q92882 214 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 SLC35G5Q96KT7 338 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 OR2M2Q96R28 347 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 CITED4Q96RK1 184 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 ARHGDIGQ99819 225 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 TEX12Q9BXU0 123 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 WDR26Q9H7D7 661 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 EMC3Q9P0I2 261 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 COPZ2Q9P299 210 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 GMEB2Q9UKD1 530 aa19.13■□□□□ 0.65
SNX3-201ENST00000230085 SHISA3A0PJX4 238 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 FPR3P25089 353 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 RABIFP47224 123 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 EPHA4P54764 986 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 CDK3Q00526 305 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 TRAM1Q15629 374 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 SPDYE7PQ495Y7 208 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 TCEAL6Q6IPX3 200 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 TEX261Q6UWH6 196 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 TMEM91Q6ZNR0 172 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 OR8D4Q8NGM9 314 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 OR6T1Q8NGN1 323 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 CEP76Q8TAP6 659 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 TCEAL3Q969E4 200 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 TEX101Q9BY14 249 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 GALNT9Q9HCQ5 603 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 IL20Q9NYY1 176 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 U3KQ87 197 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 ADAMTS9Q9P2N4 1935 aa19.12■□□□□ 0.65
SNX3-201ENST00000230085 A0A087WUU8 490 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 ZSCAN5BA6NJL1 495 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 M0R3H8 397 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 KLF4O43474 513 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 HSD17B2P37059 387 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 CAPZA2P47755 286 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 AVPR1BP47901 424 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 CDH11P55287 796 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 TRAM2Q15035 370 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 SYPL1Q16563 259 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 TYW3Q6IPR3 259 aaKnown RBP19.11■□□□□ 0.65
SNX3-201ENST00000230085 SLC23A3Q6PIS1 610 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 GLCCI1Q86VQ1 547 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 TPRA1Q86W33 373 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 AMIGO1Q86WK6 493 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 NUDT13Q86X67 352 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 ZNF740Q8NDX6 193 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 SLC9A6Q92581 669 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 RFT1Q96AA3 541 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 MOAP1Q96BY2 351 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 C7orf50Q9BRJ6 194 aaKnown RBP19.11■□□□□ 0.65
SNX3-201ENST00000230085 OR51I1Q9H343 314 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 DDX31Q9H8H2 851 aaKnown RBP19.11■□□□□ 0.65
SNX3-201ENST00000230085 CAPN10Q9HC96 672 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 ZFP64Q9NPA5 681 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 GPR27Q9NS67 375 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 GPR34Q9UPC5 381 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 LOC102723532A0A0G2JNH3 316 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 A0A1B0GVI7 797 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 TUBAL3A6NHL2 446 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 SURF4O15260 269 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 RGS9O75916 674 aaPredicted RBP19.11■□□□□ 0.65
SNX3-201ENST00000230085 RAF1P04049 648 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 PEPDP12955 493 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 POLR2CP19387 275 aaPredicted RBP19.11■□□□□ 0.65
SNX3-201ENST00000230085 ELK1P19419 428 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 NPR2P20594 1047 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 OMPP47874 163 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 CAV3P56539 151 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 YPEL5P62699 121 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 REEP5Q00765 189 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 SPEM2Q0P670 501 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 ZNF322Q6U7Q0 402 aaPredicted RBP19.11■□□□□ 0.65
SNX3-201ENST00000230085 ADAMTSL4Q6UY14 1074 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 RABEPKQ7Z6M1 372 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 UBE2J2Q8N2K1 259 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 LRRC17Q8N6Y2 441 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 FAM174AQ8TBP5 190 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 DIO2Q92813 273 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 RAD51AP1Q96B01 352 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 SORCS2Q96PQ0 1159 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 AIF1LQ9BQI0 150 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 PCBD2Q9H0N5 130 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 LHX9Q9NQ69 397 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 NCDNQ9UBB6 729 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 ENTPD4Q9Y227 616 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 NUBP2Q9Y5Y2 271 aa19.11■□□□□ 0.65
SNX3-201ENST00000230085 EP300Q09472 2414 aaPredicted RBP19.11■□□□□ 0.65
SNX3-201ENST00000230085 ANKRD61A6NGH8 418 aa19.1■□□□□ 0.65
SNX3-201ENST00000230085 GTPBP1O00178 669 aaKnown RBP19.1■□□□□ 0.65
SNX3-201ENST00000230085 NR2F1P10589 423 aa19.1■□□□□ 0.65
SNX3-201ENST00000230085 KELP23276 732 aa19.1■□□□□ 0.65
SNX3-201ENST00000230085 AHCYP23526 432 aa19.1■□□□□ 0.65
SNX3-201ENST00000230085 TEAD1P28347 426 aa19.1■□□□□ 0.65
SNX3-201ENST00000230085 BTCP35070 178 aa19.1■□□□□ 0.65
SNX3-201ENST00000230085 RGS1Q08116 209 aa19.1■□□□□ 0.65
SNX3-201ENST00000230085 RPA4Q13156 261 aa19.1■□□□□ 0.65
SNX3-201ENST00000230085 TOR2AQ5JU69 321 aa19.1■□□□□ 0.65
SNX3-201ENST00000230085 ASCL5Q7RTU5 278 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms