RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 HYKKA2RU49 373 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 EEF1E1-BLOC1S5C9J1V9 151 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 SCDO00767 359 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 FZD7O75084 574 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 SLC6A12P48065 614 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 RRAS2P62070 204 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-201ENST00000226574 CRMP1Q14194 572 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 OTPQ5XKR4 325 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 CD300LGQ6UXG3 332 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 FCRLAQ7L513 359 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 TMEM41AQ96HV5 264 aa12.88□□□□□ -0.35
NFKB1-201ENST00000226574 SAV1Q9H4B6 383 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-201ENST00000226574 METTL8Q9H825 291 aaKnown RBP12.88□□□□□ -0.35
NFKB1-201ENST00000226574 GFYI3L273 518 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 SLCO2B1O94956 709 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 AIFM1O95831 613 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 FUT1P19526 365 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 METAP1P53582 386 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 S100A10P60903 97 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 GPM6BQ13491 265 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 FAM71E1Q6IPT2 247 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 OR4M1Q8NGD0 313 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 JSRP1Q96MG2 331 aaPredicted RBP12.87□□□□□ -0.35
NFKB1-201ENST00000226574 DPYSL5Q9BPU6 564 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 A0A1B0GV50 99 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 UNCXA6NJT0 531 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 RNF13O43567 381 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 SCO2O43819 266 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 TMPRSS11DO60235 418 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 PRH1P02810 166 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 UCHL1P09936 223 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 PRKCAP17252 672 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 PCMT1P22061 227 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 CTXN1P60606 82 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 GBX1Q14549 363 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 CST6Q15828 149 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 PCGF3Q3KNV8 242 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 PLA2G15Q8NCC3 412 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF296Q8WUU4 475 aaPredicted RBP12.87□□□□□ -0.35
NFKB1-201ENST00000226574 ACOT12Q8WYK0 555 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 GCDHQ92947 438 aaPredicted RBP12.87□□□□□ -0.35
NFKB1-201ENST00000226574 CHFRQ96EP1 664 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 CHMP1AQ9HD42 196 aaPredicted RBP12.87□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF639Q9UID6 485 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 PTPRFP10586 1907 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 SLC9B1P1A6NJY1 282 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 PRDX1Q06830 199 aaKnown RBP12.87□□□□□ -0.35
NFKB1-201ENST00000226574 EFR3AQ14156 821 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 PUS10Q3MIT2 529 aaKnown RBP12.87□□□□□ -0.35
NFKB1-201ENST00000226574 MPP7Q5T2T1 576 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 SLX4IPQ5VYV7 408 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF227Q86WZ6 799 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 FAM109AQ8N4B1 249 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 BBS1Q8NFJ9 593 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 NXPE2Q96DL1 559 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 SAMD11Q96NU1 681 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 OR2M4Q96R27 311 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 INSM2Q96T92 566 aaPredicted RBP12.87□□□□□ -0.35
NFKB1-201ENST00000226574 PKMYT1Q99640 499 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 PDCD1LG2Q9BQ51 273 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 SPATA6Q9NWH7 488 aaPredicted RBP12.87□□□□□ -0.35
NFKB1-201ENST00000226574 UPB1Q9UBR1 384 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 NAALAD2Q9Y3Q0 740 aa12.87□□□□□ -0.35
NFKB1-201ENST00000226574 B4DXG7 233 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 H3BNC9 293 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 PRKNO60260 465 aaPredicted RBP12.86□□□□□ -0.35
NFKB1-201ENST00000226574 SYPP08247 313 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 LIM2P55344 173 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 ZNF776Q68DI1 518 aaPredicted RBP12.86□□□□□ -0.35
NFKB1-201ENST00000226574 DGLUCYQ7Z3D6 616 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 C7orf61Q8IZ16 206 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 PRR22Q8IZ63 422 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 THAP6Q8TBB0 222 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 ZFPM2Q8WW38 1151 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 GIMAP1Q8WWP7 306 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 SGTBQ96EQ0 304 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 CNN2Q99439 309 aaKnown RBP12.86□□□□□ -0.35
NFKB1-201ENST00000226574 KATNB1Q9BVA0 655 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 GON7Q9BXV9 100 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 HHATLQ9HCP6 504 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 SPTBN2O15020 2390 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 YY2O15391 372 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 CSF3P09919 207 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 CEBPBP17676 345 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 TEAD1P28347 426 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 GABRA5P31644 462 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 SLC6A9P48067 706 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 CDK3Q00526 305 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 HNRNPA1L2Q32P51 320 aaKnown RBP12.86□□□□□ -0.35
NFKB1-201ENST00000226574 SAXO2Q658L1 398 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 FAHD1Q6P587 224 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 KIF18BQ86Y91 864 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 PLCZ1Q86YW0 608 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 IQCF2Q8IXL9 164 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 HCAR2Q8TDS4 363 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 TNFRSF13CQ96RJ3 184 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 ZMAT3Q9HA38 289 aaKnown RBP12.86□□□□□ -0.35
NFKB1-201ENST00000226574 KLHL42Q9P2K6 505 aa12.86□□□□□ -0.35
NFKB1-201ENST00000226574 RBM7Q9Y580 266 aaKnown RBP12.86□□□□□ -0.35
NFKB1-201ENST00000226574 HEBP2Q9Y5Z4 205 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms