RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 UBQLN3Q9H347 655 aa24.26■■□□□ 1.47
STUB1-201ENST00000219548 CACYBPQ9HB71 228 aaKnown RBP24.26■■□□□ 1.47
STUB1-201ENST00000219548 OLAHQ9NV23 265 aa24.26■■□□□ 1.47
STUB1-201ENST00000219548 IGLV3-32A0A0A0MS00 114 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 NPIPA5E9PKD4 350 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 ZNF264O43296 627 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 CYP7B1O75881 506 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 TCN1P20061 433 aaPredicted RBP24.25■■□□□ 1.47
STUB1-201ENST00000219548 PGM1P36871 562 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 VEZF1Q14119 521 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 TOMM20Q15388 145 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 LIN52Q52LA3 116 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 SIAH3Q8IW03 269 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 FAM109AQ8N4B1 249 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 TMCO5AQ8N6Q1 288 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 CPT1CQ8TCG5 803 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 NR4A3Q92570 626 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 DEFB127Q9H1M4 99 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 RLIMQ9NVW2 624 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 NPIPA1Q9UND3 350 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 CHST2Q9Y4C5 530 aa24.25■■□□□ 1.47
STUB1-201ENST00000219548 M0QX08 132 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 DNAJA2O60884 412 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 CBR3O75828 277 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 THBS1P07996 1170 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 ADH7P40394 386 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 EEF1A1P68104 462 aaKnown RBP24.24■■□□□ 1.47
STUB1-201ENST00000219548 DMTNQ08495 405 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 SKP2Q13309 424 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 LARS2Q15031 903 aaKnown RBP24.24■■□□□ 1.47
STUB1-201ENST00000219548 CMPK2Q5EBM0 449 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 SAMD4BQ5PRF9 694 aaKnown RBP24.24■■□□□ 1.47
STUB1-201ENST00000219548 ZNF324BQ6AW86 544 aaPredicted RBP24.24■■□□□ 1.47
STUB1-201ENST00000219548 B4GALNT2Q8NHY0 566 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 CNOT9Q92600 299 aaKnown RBP24.24■■□□□ 1.47
STUB1-201ENST00000219548 SEC14L3Q9UDX4 400 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 ZNF232Q9UNY5 417 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 SLC35A3Q9Y2D2 325 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 IFT52Q9Y366 437 aa24.24■■□□□ 1.47
STUB1-201ENST00000219548 GTF3C1Q12789 2109 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 TRAPPC6AO75865 159 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 PDE9AO76083 593 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 TCEA1P23193 301 aaKnown RBP24.23■■□□□ 1.47
STUB1-201ENST00000219548 MSX2P35548 267 aaPredicted RBP24.23■■□□□ 1.47
STUB1-201ENST00000219548 CCR4P51679 360 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 CRYBA2P53672 197 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 CEACAM7Q14002 265 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 PATL1Q86TB9 770 aaKnown RBP24.23■■□□□ 1.47
STUB1-201ENST00000219548 ARMC8Q8IUR7 673 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 CLIP4Q8N3C7 705 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 SMYD1Q8NB12 490 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 FAM71CQ8NEG0 241 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 FIG4Q92562 907 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 TAMM41Q96BW9 452 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 SPATA5L1Q9BVQ7 753 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 ZDHHC11Q9H8X9 412 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 AGPAT4Q9NRZ5 378 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 CD300AQ9UGN4 299 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 EGFL7Q9UHF1 273 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 ICAM5Q9UMF0 924 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 LIPGQ9Y5X9 500 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 ZNF462Q96JM2 2506 aa24.23■■□□□ 1.47
STUB1-201ENST00000219548 B8ZZF3 427 aa24.22■■□□□ 1.47
STUB1-201ENST00000219548 GSTA4O15217 222 aa24.22■■□□□ 1.47
STUB1-201ENST00000219548 CDC40O60508 579 aaKnown RBP eCLIP24.22■■□□□ 1.47
STUB1-201ENST00000219548 SERPINB7O75635 380 aa24.22■■□□□ 1.47
STUB1-201ENST00000219548 MFN2O95140 757 aa24.22■■□□□ 1.47
STUB1-201ENST00000219548 NCK1P16333 377 aa24.22■■□□□ 1.47
STUB1-201ENST00000219548 ENDOUP21128 410 aaKnown RBP24.22■■□□□ 1.47
STUB1-201ENST00000219548 LRRC23Q53EV4 343 aaPredicted RBP24.22■■□□□ 1.47
STUB1-201ENST00000219548 RNF220Q5VTB9 566 aa24.22■■□□□ 1.47
STUB1-201ENST00000219548 CCDC80Q76M96 950 aa24.22■■□□□ 1.47
STUB1-201ENST00000219548 PRICKLE2Q7Z3G6 844 aa24.22■■□□□ 1.47
STUB1-201ENST00000219548 CMIPQ8IY22 773 aa24.22■■□□□ 1.47
STUB1-201ENST00000219548 BARD1Q99728 777 aaKnown RBP24.22■■□□□ 1.47
STUB1-201ENST00000219548 DNAJB12Q9NXW2 375 aaKnown RBP24.22■■□□□ 1.47
STUB1-201ENST00000219548 DKKL1Q9UK85 242 aa24.22■■□□□ 1.47
STUB1-201ENST00000219548 CDHR4A6H8M9 788 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 CXCR6O00574 342 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 GYG2O15488 501 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 TPST1O60507 370 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 EIF4E2O60573 245 aaKnown RBP24.21■■□□□ 1.47
STUB1-201ENST00000219548 HSD17B1P14061 328 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 DPP4P27487 766 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 P2RX1P51575 399 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 GLIPR1L2Q4G1C9 344 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 COMTD1Q86VU5 262 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 SLX1AQ9BQ83 275 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 LAT2Q9GZY6 243 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 PTGES2Q9H7Z7 377 aa24.21■■□□□ 1.47
STUB1-201ENST00000219548 EBAG9O00559 213 aa24.2■■□□□ 1.47
STUB1-201ENST00000219548 NUDT14O95848 222 aa24.2■■□□□ 1.47
STUB1-201ENST00000219548 MSX1P28360 303 aa24.2■■□□□ 1.47
STUB1-201ENST00000219548 HTR1EP28566 365 aa24.2■■□□□ 1.47
STUB1-201ENST00000219548 PRKAR1BP31321 381 aa24.2■■□□□ 1.47
STUB1-201ENST00000219548 TDGF1P3P51864 188 aa24.2■■□□□ 1.47
STUB1-201ENST00000219548 ARSKQ6UWY0 536 aa24.2■■□□□ 1.47
STUB1-201ENST00000219548 YRDCQ86U90 279 aaKnown RBP24.2■■□□□ 1.47
STUB1-201ENST00000219548 FAM83FQ8NEG4 500 aaPredicted RBP24.2■■□□□ 1.47
STUB1-201ENST00000219548 C1GALT1C1Q96EU7 318 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms