RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 OR10H4Q8NGA5 316 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 RFT1Q96AA3 541 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 CITED4Q96RK1 184 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 PRSS27Q9BQR3 290 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 CACYBPQ9HB71 228 aaKnown RBP16.06■□□□□ 0.16
USB1-201ENST00000219281 PHPT1Q9NRX4 125 aaPredicted RBP16.06■□□□□ 0.16
USB1-201ENST00000219281 PHF11Q9UIL8 331 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 TRPM6Q9BX84 2022 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 CEP290O15078 2479 aa16.06■□□□□ 0.16
USB1-201ENST00000219281 GPR89AB7ZAQ6 455 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 E9PI62 339 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 LINC01565O15544 149 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 NARSO43776 548 aaKnown RBP16.05■□□□□ 0.16
USB1-201ENST00000219281 GKN3PP0CG01 181 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 GPR89BP0CG08 455 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 MAKP20794 623 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 CMPK1P30085 196 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 WDR88Q6ZMY6 472 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 BRIX1Q8TDN6 353 aaKnown RBP16.05■□□□□ 0.16
USB1-201ENST00000219281 DOK4Q8TEW6 326 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 C10orf90Q96M02 699 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 MS4A4EQ96PG1 132 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 ATP13A2Q9NQ11 1180 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 TRIM36Q9NQ86 728 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 LYARQ9NX58 379 aaKnown RBP16.05■□□□□ 0.16
USB1-201ENST00000219281 RASD1Q9Y272 281 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 DOCK8Q8NF50 2099 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 A0A0A6YYJ9 748 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 ZNF888P0CJ79 500 aaPredicted RBP16.05■□□□□ 0.16
USB1-201ENST00000219281 THBS2P35442 1172 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 TSFMP43897 325 aaKnown RBP16.05■□□□□ 0.16
USB1-201ENST00000219281 SLC16A1P53985 500 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 GALEQ14376 348 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 DUSP5Q16690 384 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 GPR135Q8IZ08 494 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 LRRC25Q8N386 305 aaPredicted RBP16.05■□□□□ 0.16
USB1-201ENST00000219281 TOR1AIP2Q8NFQ8 470 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 OR52L1Q8NGH7 329 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 TIMM29Q9BSF4 260 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 RPP25Q9BUL9 199 aaKnown RBP16.05■□□□□ 0.16
USB1-201ENST00000219281 ABCG5Q9H222 651 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 C20orf141Q9NUB4 165 aa16.05■□□□□ 0.16
USB1-201ENST00000219281 SIDT1Q9NXL6 827 aaKnown RBP16.05■□□□□ 0.16
USB1-201ENST00000219281 TMA7Q9Y2S6 64 aaKnown RBP16.05■□□□□ 0.16
USB1-201ENST00000219281 BHLHE40O14503 412 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 EEF1E1O43324 174 aaKnown RBP16.04■□□□□ 0.16
USB1-201ENST00000219281 CEACAM5P06731 702 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 MRPL3P09001 348 aaKnown RBP16.04■□□□□ 0.16
USB1-201ENST00000219281 RPS7P62081 194 aaKnown RBP16.04■□□□□ 0.16
USB1-201ENST00000219281 EEF1A1P68104 462 aaKnown RBP16.04■□□□□ 0.16
USB1-201ENST00000219281 E2F1Q01094 437 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 SLC3A1Q07837 685 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 RPE65Q16518 533 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 ARHGAP11BQ3KRB8 267 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 PLA1AQ53H76 456 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 C2orf27AQ580R0 203 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 PRPF38BQ5VTL8 546 aaKnown RBP16.04■□□□□ 0.16
USB1-201ENST00000219281 HDDC3Q8N4P3 179 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 HS6ST2Q96MM7 605 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 CD180Q99467 661 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 SARGQ9BW04 601 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 NCKAP1Q9Y2A7 1128 aa16.04■□□□□ 0.16
USB1-201ENST00000219281 A0A1W2PP55 124 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 IFI30P13284 250 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 BMP7P18075 431 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 F8A1P23610 371 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 HTR2AP28223 471 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 TEAD1P28347 426 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 RFX3P48380 749 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 PITPNBP48739 271 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 SRP9P49458 86 aaKnown RBP16.03■□□□□ 0.16
USB1-201ENST00000219281 CST6Q15828 149 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 MAPK14Q16539 360 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 BCL2L15Q5TBC7 163 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 FAM205BPQ63HN1 556 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 BICRALQ6AI39 1079 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 FCRLBQ6BAA4 426 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 SFXN4Q6P4A7 337 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 CEACAM19Q7Z692 300 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 RANBP3LQ86VV4 465 aaPredicted RBP16.03■□□□□ 0.16
USB1-201ENST00000219281 SMAP2Q8WU79 429 aaPredicted RBP16.03■□□□□ 0.16
USB1-201ENST00000219281 PTP4A1Q93096 173 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 KISS1RQ969F8 398 aaPredicted RBP16.03■□□□□ 0.16
USB1-201ENST00000219281 AHCYL2Q96HN2 611 aaKnown RBP16.03■□□□□ 0.16
USB1-201ENST00000219281 MYADMQ96S97 322 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 OR51V1Q9H2C8 321 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 FN3KQ9H479 309 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 ZNF223Q9UK11 482 aaPredicted RBP16.03■□□□□ 0.16
USB1-201ENST00000219281 EYSQ5T1H1 3165 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 DENND4AQ7Z401 1863 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 DOCK9Q9BZ29 2069 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 TBC1D3KA0A087X1G2 549 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 TRAPPC13A5PLN9 417 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 TBC1D3FA6NER0 549 aaPredicted RBP16.03■□□□□ 0.16
USB1-201ENST00000219281 RNGTTO60942 597 aaKnown RBP16.03■□□□□ 0.16
USB1-201ENST00000219281 AHCYP23526 432 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 RBMS1P29558 406 aaKnown RBP16.03■□□□□ 0.16
USB1-201ENST00000219281 ACSL1P33121 698 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 BTG1P62324 171 aa16.03■□□□□ 0.16
USB1-201ENST00000219281 FCN2Q15485 313 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms